RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SPECC1LQ69YQ0 1117 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 CAPRIN2Q6IMN6 1127 aaKnown RBP9.2□□□□□ -0.94
CAST-220ENST00000508117 ENOSF1Q7L5Y1 443 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 TAF8Q7Z7C8 310 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 TICAM1Q8IUC6 712 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 ZDHHC17Q8IUH5 632 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 ARHGEF19Q8IW93 802 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 SMYD4Q8IYR2 804 aaPredicted RBP9.2□□□□□ -0.94
CAST-220ENST00000508117 RYBPQ8N488 228 aaPredicted RBP9.2□□□□□ -0.94
CAST-220ENST00000508117 WDTC1Q8N5D0 677 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 C1orf131Q8NDD1 294 aaKnown RBP9.2□□□□□ -0.94
CAST-220ENST00000508117 EHBP1Q8NDI1 1231 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 OR4D9Q8NGE8 314 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 PMEPA1Q969W9 287 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 PDXPQ96GD0 296 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
CAST-220ENST00000508117 ZYG11BQ9C0D3 744 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 GPN2Q9H9Y4 310 aaPredicted RBP9.2□□□□□ -0.94
CAST-220ENST00000508117 RDH14Q9HBH5 336 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 PRDM8Q9NQV8 689 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 PILRAQ9UKJ1 303 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 STAP1Q9ULZ2 295 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 KCTD3Q9Y597 815 aa9.2□□□□□ -0.94
CAST-220ENST00000508117 ANKRD36A6QL64 1941 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CRYBG3Q68DQ2 2970 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CFAP69A5D8W1 941 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 ZSCAN5CA6NGD5 496 aaPredicted RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 AGRPO00253 132 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 THAP12O43422 761 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 VPS4BO75351 444 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 DDAH2O95865 285 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 KRT7P08729 469 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 THRAP10827 490 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 KRT5P13647 590 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 KELP23276 732 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CD1CP29017 333 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CSTF2P33240 577 aaKnown RBP eCLIP9.19□□□□□ -0.94
CAST-220ENST00000508117 SCNN1AP37088 669 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 PMS1P54277 932 aaKnown RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 RIPPLY3P57055 190 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 DNM1Q05193 864 aaKnown RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 ABHD18Q0P651 414 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 ARHGAP44Q17R89 818 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 FOXD4L6Q3SYB3 417 aaPredicted RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 DCAF12Q5T6F0 453 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 ZNF658Q5TYW1 1059 aaPredicted RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 FOXD4L3Q6VB84 417 aaPredicted RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 FAM183BPQ6ZVS7 135 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 NLGN4XQ8N0W4 816 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CYP4X1Q8N118 509 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 TEX19Q8NA77 164 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 RCBTB1Q8NDN9 531 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 NLGN4YQ8NFZ3 816 aaPredicted RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 OR56A4Q8NGH8 313 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 OR6K2Q8NGY2 324 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CASKIN2Q8WXE0 1202 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 OR1E3Q8WZA6 343 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 ART4Q93070 314 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CCDC34Q96HJ3 373 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 FAM81BQ96LP2 452 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 CCDC74BQ96LY2 380 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 GDAP1L1Q96MZ0 367 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 NUDT22Q9BRQ3 303 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 ZPBPQ9BS86 351 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 MAGEH1Q9H213 219 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 TRIT1Q9H3H1 467 aaKnown RBP9.19□□□□□ -0.94
CAST-220ENST00000508117 DPEP2Q9H4A9 486 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 RMND1Q9NWS8 449 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 SLC39A1Q9NY26 324 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.19□□□□□ -0.94
CAST-220ENST00000508117 PDP2Q9P2J9 529 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 HPCAL4Q9UM19 191 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 VPS4AQ9UN37 437 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 TP53TG5Q9Y2B4 290 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 OR1A2Q9Y585 309 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 SNX10Q9Y5X0 201 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
CAST-220ENST00000508117 FBN2P35556 2912 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 TSPAN11A1L157 253 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 EFCAB7A8K855 629 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 RHPN2P1A8MT19 583 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 B4DGG1 531 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 MKRN2OSH3BPM6 223 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 CACNB4O00305 520 aaPredicted RBP9.18□□□□□ -0.94
CAST-220ENST00000508117 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 DUX1O43812 170 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 TFE3P19532 575 aaPredicted RBP9.18□□□□□ -0.94
CAST-220ENST00000508117 ITIH2P19823 946 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 OAS2P29728 719 aaKnown RBP9.18□□□□□ -0.94
CAST-220ENST00000508117 MAN1A1P33908 653 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 TRIM23P36406 574 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 ACVRL1P37023 503 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 STAT1P42224 750 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 UQCRFS1P47985 274 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 MAPKAPK2P49137 400 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 MLLT10P55197 1068 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 OR1D5P58170 312 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms