RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 LINGO4Q6UY18 593 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 DPY19L3Q6ZPD9 716 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 ERN2Q76MJ5 926 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 PHLDB2Q86SQ0 1253 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 MCOLN2Q8IZK6 566 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 OXR1Q8N573 874 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 OR7D4Q8NG98 312 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CASKIN2Q8WXE0 1202 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 ARHGEF2Q92974 986 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 LRRC45Q96CN5 670 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 TBC1D31Q96DN5 1066 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 PPP1R16AQ96I34 528 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 SLC6A18Q96N87 628 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CCT8L2Q96SF2 557 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 HEPHQ9BQS7 1158 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 DESI2Q9BSY9 194 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 SYT11Q9BT88 431 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 DYRK4Q9NR20 520 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 GDF3Q9NR23 364 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 AASDHPPTQ9NRN7 309 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 PARVAQ9NVD7 372 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 NOP53Q9NZM5 478 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 IL36AQ9UHA7 158 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 MAP1BP46821 2468 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 PLXNA2O75051 1894 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 WASH4PA8MWX3 477 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FAM72CH0Y354 149 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 KPNA3O00505 521 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 KCNK3O14649 394 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 WNT9AO14904 365 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 TNFSF14O43557 240 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 HYAL3O43820 417 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 BNIP3LO60238 219 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RAMP2O60895 175 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 LEFTY1O75610 366 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 GJB6O95452 261 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 POP4O95707 220 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CD160O95971 181 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 TOP3BO95985 862 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 C1SP09871 688 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FTH1P19P0C7X4 201 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 PECAM1P16284 738 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 GLDCP23378 1020 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 GPC1P35052 558 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 PRKCIP41743 596 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 NUMBP49757 651 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CCNG1P51959 295 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 METAP1P53582 386 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 NXPH1P58417 271 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RPL7AP62424 266 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 KIF5AQ12840 1032 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 MAMLD1Q13495 774 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 POLD3Q15054 466 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RAB6CQ53S08 254 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 INO80DQ53TQ3 878 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 EFHC2Q5JST6 749 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RNF187Q5TA31 235 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FAM72AQ5TYM5 149 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 AGBL2Q5U5Z8 902 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 GKAP1Q5VSY0 366 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 SFMBT2Q5VUG0 894 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 PLEKHA7Q6IQ23 1121 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FAM72DQ6L9T8 149 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RWDD4Q6NW29 188 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 DCUN1D2Q6PH85 259 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 UNQ6494/PRO21346Q6UXR6 183 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 LYSMD3Q7Z3D4 306 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 SLCO6A1Q86UG4 719 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 HORMAD1Q86X24 394 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FAM72BQ86X60 149 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 DCP2Q8IU60 420 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CACNA2D3Q8IZS8 1091 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 IQCKQ8N0W5 287 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 UMODL1-AS1Q8N2C9 162 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CHCHD4Q8N4Q1 142 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RNF10Q8N5U6 811 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CCDC185Q8N715 623 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CHST14Q8NCH0 376 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 SAP25Q8TEE9 199 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 ZNF483Q8TF39 744 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 ZFAND2BQ8WV99 257 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 GATA6Q92908 595 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RAB7BQ96AH8 199 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FEM1CQ96JP0 617 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 MAGEB5Q9BZ81 275 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 RAB6CQ9H0N0 254 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CATSPERBQ9H7T0 1116 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 NDFIP2Q9NV92 336 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 SEPT11Q9NVA2 429 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 HECAQ9UBI9 543 aaPredicted RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 FZD10Q9ULW2 581 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 LUC7L2Q9Y383 392 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 HYOU1Q9Y4L1 999 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 HS3ST3A1Q9Y663 406 aa8.13□□□□□ -1.11
SCN1A-207ENST00000507401 BZW2Q9Y6E2 419 aaKnown RBP8.13□□□□□ -1.11
SCN1A-207ENST00000507401 TMEM131Q92545 1883 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms