RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TRIB3Q96RU7 358 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 MLPHQ9BV36 600 aaPredicted RBP8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 RSPH14Q9UHP6 348 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CDC23Q9UJX2 597 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SARDHQ9UL12 918 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CYP8B1Q9UNU6 501 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF292O60281 2723 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 FAM187AA6NFU0 413 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 USP27XA6NNY8 438 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 NEMP1O14524 444 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ENC1O14682 589 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 MUSKO15146 869 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ECEL1O95672 775 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 AP2A1O95782 977 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 MMP2P08253 660 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF806P0C7X5 589 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 TPSB2P20231 275 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 KELP23276 732 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PSMA3P25788 255 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 HMGCLP35914 325 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 COILP38432 576 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 HADHAP40939 763 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 RABIFP47224 123 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 NHLH1Q02575 133 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 MTM1Q13496 603 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PTK2BQ14289 1009 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 TPSAB1Q15661 275 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ATXN7L2Q5T6C5 722 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 KCTD11Q693B1 232 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 KDELC1Q6UW63 502 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 RANBP10Q6VN20 620 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 CEP128Q6ZU80 1094 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 HOOK3Q86VS8 718 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 TP53INP2Q8IXH6 220 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF366Q8N895 744 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 TMEM145Q8NBT3 493 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 MCUQ8NE86 351 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 MAGOHBQ96A72 148 aaKnown RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ARRDC3Q96B67 414 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 SGSM3Q96HU1 749 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 AGAP3Q96P47 875 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PLEKHG4BQ96PX9 1271 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 WDR24Q96S15 920 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 TSPYL1Q9H0U9 437 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF106Q9H2Y7 1883 aaKnown RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PCDH12Q9NPG4 1184 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 C2orf42Q9NWW7 574 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 SAE1Q9UBE0 346 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 MBD1Q9UIS9 605 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PILRBQ9UKJ0 227 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3DA0A087WVF3 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3IA0A087WXS9 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3EA0A087X179 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3KA0A087X1G2 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 MAGEB16A2A368 324 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3FA6NER0 549 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 MEI4A8MW99 385 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3LB9A6J9 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 F8W8V4 182 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TNFRSF10CO14798 259 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 VILLO15195 856 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 BCAT2O15382 392 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 BNIP3LO60238 219 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF500O60304 480 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 HEXIM1O94992 359 aaKnown RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CRTAMO95727 393 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 PRLP01236 227 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ELFN1P0C7U0 828 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3HP0C7X1 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TSHRP16473 764 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ACSL1P33121 698 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CD68P34810 354 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ADRA1AP35348 466 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CD86P42081 329 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 RGRP47804 291 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 LIMK1P53667 647 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 DRG2P55039 364 aaKnown RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 WNT3AP56704 352 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TAS2R38P59533 333 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ARHGAP8P85298 464 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 DSC2Q02487 901 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CDH17Q12864 832 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TRAF2Q12933 501 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 SLC14A1Q13336 389 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 SLC1A5Q15758 541 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CSRP2Q16527 193 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF284Q2VY69 593 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 GLE1Q53GS7 698 aaKnown RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3GQ6DHY5 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3CQ6IPX1 549 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ESRP1Q6NXG1 681 aaKnown RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 LIPIQ6XZB0 460 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 KYAT3Q6YP21 454 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms