RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 AMACRQ9UHK6 382 aa11.5□□□□□ -0.57
KDM3B-203ENST00000505756 EFR3BQ9Y2G0 817 aa11.5□□□□□ -0.57
KDM3B-203ENST00000505756 ATP8A1Q9Y2Q0 1164 aa11.5□□□□□ -0.57
KDM3B-203ENST00000505756 ASCC3Q8N3C0 2202 aaKnown RBP11.5□□□□□ -0.57
KDM3B-203ENST00000505756 TMEM131Q92545 1883 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 SPAARA0A1B0GVQ0 90 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 RAD51BO15315 384 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 MMP20O60882 483 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 URI1O94763 535 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 MAP3K6O95382 1288 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 ITIH2P19823 946 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 EPHA8P29322 1005 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 PMLP29590 882 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 MMP12P39900 470 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 RABIFP47224 123 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 MAXP61244 160 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 SIM1P81133 766 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 IL9RQ01113 521 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 CKAP4Q07065 602 aaKnown RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 SLC10A2Q12908 348 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 SHBQ15464 509 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 Q6ZSR6 202 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 GLRX5Q86SX6 157 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 OR13H1Q8NG92 308 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 BAHD1Q8TBE0 780 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 RHBDD1Q8TEB9 315 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 SAP25Q8TEE9 199 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 BMFQ96LC9 184 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 NSMCE3Q96MG7 304 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 CDC6Q99741 560 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 WRAP53Q9BUR4 548 aaKnown RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
KDM3B-203ENST00000505756 NOD2Q9HC29 1040 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 NT5MQ9NPB1 228 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 GPR27Q9NS67 375 aa11.49□□□□□ -0.57
KDM3B-203ENST00000505756 TTC24A2A3L6 582 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CFAP69A5D8W1 941 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 POM121BA6NF01 834 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 TOR1BO14657 336 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 HTRA2O43464 458 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 ITGAVP06756 1048 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 C6P13671 934 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CCNB1P14635 433 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CES1P23141 567 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 NFKBIAP25963 317 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CDKN2BP42772 138 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 LIG3P49916 1009 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 FAM193AP78312 1265 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 PPIDQ08752 370 aaKnown RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 AGERQ15109 404 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 ALG1LQ6GMV1 187 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 MFSD7Q6UXD7 560 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 DPPA4Q7L190 304 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 RFX6Q8HWS3 928 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 SLC22A18ASQ8N1D0 253 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CEP112Q8N8E3 955 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 TP53I13Q8NBR0 393 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CCNYQ8ND76 341 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 CENPTQ96BT3 561 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 IFT43Q96FT9 208 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 BTBD3Q9Y2F9 522 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 PCDHGC4Q9Y5F7 938 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
KDM3B-203ENST00000505756 TP53BP1Q12888 1972 aaPredicted RBP11.48□□□□□ -0.57
KDM3B-203ENST00000505756 PDE2AO00408 941 aaPredicted RBP11.47□□□□□ -0.57
KDM3B-203ENST00000505756 PPP1R12AO14974 1030 aaPredicted RBP11.47□□□□□ -0.57
KDM3B-203ENST00000505756 NEBLO76041 1014 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 TRIM16O95361 564 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 CPP00450 1065 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 PRKCGP05129 697 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 PYGMP11217 842 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 PFN3P60673 137 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 YPEL5P62699 121 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 DYNLT1P63172 113 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 ITKQ08881 620 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 TRAF2Q12933 501 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 RALGDSQ12967 914 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 BNIP3Q12983 259 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 TFDP2Q14188 446 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 PDK1Q15118 436 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 ARMC12Q5T9G4 340 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 SEL1L2Q5TEA6 688 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
KDM3B-203ENST00000505756 GATAD2AQ86YP4 633 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 RCOR2Q8IZ40 523 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 MNS1Q8NEH6 495 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 PDCD6IPQ8WUM4 868 aaKnown RBP11.47□□□□□ -0.57
KDM3B-203ENST00000505756 OLFM3Q96PB7 478 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 LGMNQ99538 433 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 SEMA3CQ99985 751 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
KDM3B-203ENST00000505756 RBM22Q9NW64 420 aaKnown RBP eCLIP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms