RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 MCEEQ96PE7 176 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 RBM15Q96T37 977 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 PCDHB18PQ96TA0 734 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 AGPAT1Q99943 283 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 CINPQ9BW66 212 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 KLC2Q9H0B6 622 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 LRRN3Q9H3W5 708 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 LHX3Q9UBR4 397 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 APPL1Q9UKG1 709 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 COQ6Q9Y2Z9 468 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 COL6A6A6NMZ7 2263 aa11.19□□□□□ -0.62
UBE2D3-219ENST00000505207 RP1P56715 2156 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 MGAQ8IWI9 3026 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 A0A1W2PNU3 283 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 D6RAR5 112 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 NVLO15381 856 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 INSIG1O15503 277 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 RNF8O76064 485 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 ZIC2O95409 532 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 ELFN1P0C7U0 828 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 SFTPCP11686 197 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 FERP16591 822 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 SLC5A2P31639 672 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 MMP12P39900 470 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 KLK7P49862 253 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 COPB1P53618 953 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 KIAA1024LP59773 190 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 UBXN1Q04323 297 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 NSUN2Q08J23 767 aaKnown RBP eCLIP11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 LY6DQ14210 128 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 TMEM164Q5U3C3 297 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 ACAD10Q6JQN1 1059 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 OGFOD3Q6PK18 319 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 USP53Q70EK8 1073 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 MON1BQ7L1V2 547 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 CCNJLQ8IV13 435 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 KIAA1524Q8TCG1 905 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 VOPP1Q96AW1 172 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 CMKLR1Q99788 373 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 ARHGAP9Q9BRR9 750 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 LRRC19Q9H756 370 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 SP110Q9HB58 689 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 PARVAQ9NVD7 372 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 FANCLQ9NW38 375 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 ACSL6Q9UKU0 697 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 PNMA8BQ9ULN7 279 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 SIK3Q9Y2K2 1263 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 OR1A2Q9Y585 309 aa11.18□□□□□ -0.62
UBE2D3-219ENST00000505207 CHD5Q8TDI0 1954 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 LGALS16A8MUM7 142 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 J3KR12 359 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 RECQL5O94762 991 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 CELA2BP08218 269 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 TNFAIP3P21580 790 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 CD82P27701 267 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 PAPOLAP51003 745 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 AP1S1P61966 158 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 BIRC2Q13490 618 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 CLPPQ16740 277 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 ERMARDQ5T6L9 678 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 SASS6Q6UVJ0 657 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 PSTKQ8IV42 348 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 MCOLN2Q8IZK6 566 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 LZTR1Q8N653 840 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 Q8N9G6 341 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 NETO2Q8NC67 525 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 GPR156Q8NFN8 814 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 SGF29Q96ES7 293 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 DHX35Q9H5Z1 703 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 PDFQ9HBH1 243 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 LRIT1Q9P2V4 623 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 PISDQ9UG56 409 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 SEPT3Q9UH03 358 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 LIMA1Q9UHB6 759 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 MOSPD1Q9UJG1 213 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 METRNQ9UJH8 293 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 AP4E1Q9UPM8 1137 aa11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 HEMK1Q9Y5R4 338 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-219ENST00000505207 CFAP46Q8IYW2 2715 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 LRRC10BA6NIK2 292 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 EPHB6O15197 1021 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 NUDT21O43809 227 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 PRPSAP2O60256 369 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 BUB1BO60566 1050 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 ITGB2P05107 769 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 LIPCP11150 499 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 KRT10P13645 584 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 PSMA2P25787 234 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 TRIM23P36406 574 aa11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 HSPA9P38646 679 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-219ENST00000505207 PDX1P52945 283 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms