RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CDK18Q07002 472 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SURF1Q15526 300 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PYCR3Q53H96 274 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 UBE2UQ5VVX9 321 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 NIPAL1Q6NVV3 410 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 MAMDC4Q6UXC1 1216 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SLC22A16Q86VW1 577 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CENPLQ8N0S6 344 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ABHD11Q8NFV4 315 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 OR52K2Q8NGK3 314 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CLIP3Q96DZ5 547 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 C1orf50Q9BV19 199 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 NT5C1AQ9BXI3 368 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 TPK1Q9H3S4 243 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 RAD21L1Q9H4I0 556 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PALMDQ9NP74 551 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ATAD3AQ9NVI7 634 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 INVSQ9Y283 1065 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 BOLA1Q9Y3E2 137 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 A0A0J9YYE9 177 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ZCWPW2A0A1B0GU75 182 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ANGPT2O15123 496 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 INMTO95050 263 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ARIH2O95376 493 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 DLGAP3O95886 979 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 LMO2P25791 158 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 RPL26P61254 145 aaKnown RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 VBP1P61758 197 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 LRP8Q14114 963 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 GRB7Q14451 532 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MOGQ16653 247 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 INAVAQ3KP66 663 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 TSTD2Q5T7W7 516 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF470Q6ECI4 717 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 PPP4R4Q6NUP7 873 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ZYG11AQ6WRX3 759 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 R3HCC1LQ7Z5L2 792 aaKnown RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF354CQ86Y25 554 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MFSD6LQ8IWD5 586 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 C17orf50Q8WW18 174 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 STARD8Q92502 1023 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 RNF34Q969K3 372 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 QKIQ96PU8 341 aaKnown RBP eCLIP7.65□□□□□ -1.189e-8■■■□□ 18.7
NEDD9-208ENST00000504387 SLX1AQ9BQ83 275 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 BBS2Q9BXC9 721 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CDT1Q9H211 546 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ALG2Q9H553 416 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ALG9Q9H6U8 611 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 PRDM16Q9HAZ2 1276 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CRYL1Q9Y2S2 319 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 TIMM22Q9Y584 194 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CPQQ9Y646 472 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 STYXL1Q9Y6J8 313 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 FOCADQ5VW36 1801 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 BRWD3Q6RI45 1802 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 FAM95CA0A1B0GW59 222 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MAFGO15525 162 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 XPNPEP2O43895 674 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ALDH1A2O94788 518 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 VDRP11473 427 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CYP4B1P13584 511 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MZF1P28698 734 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ARPP19P56211 112 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 FKBP1AP62942 108 aaKnown RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CCNA1P78396 465 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 AQP6Q13520 282 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 INAQ16352 499 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 USP41Q3LFD5 358 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 SAMD4BQ5PRF9 694 aaKnown RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 IQSEC1Q6DN90 963 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 RWDD4Q6NW29 188 aaKnown RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MPZL3Q6UWV2 235 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ERMP1Q7Z2K6 904 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CUZD1Q86UP6 607 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 ZCCHC7Q8N3Z6 543 aaKnown RBP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 CNTD1Q8N815 330 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 HM13Q8TCT9 377 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 SH3RF2Q8TEC5 729 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 RNF139Q8WU17 664 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 PPP1R14BQ96C90 147 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 TUBGCP3Q96CW5 907 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MED10Q9BTT4 135 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 NACA2Q9H009 215 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 SMARCAD1Q9H4L7 1026 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 NANOGQ9H9S0 305 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 TBC1D13Q9NVG8 400 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.65□□□□□ -1.18
NEDD9-208ENST00000504387 PIM2Q9P1W9 311 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 MORF4L1Q9UBU8 362 aa7.65□□□□□ -1.18
NEDD9-208ENST00000504387 TMEM114B3SHH9 223 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 DFFAO00273 331 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 SULT1C4O75897 302 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 CLPXO76031 633 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 NADKO95544 446 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-208ENST00000504387 STMN1P16949 149 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 AKAP5P24588 427 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 TKTP29401 623 aaKnown RBP7.65□□□□□ -1.19
NEDD9-208ENST00000504387 RPS9P46781 194 aaKnown RBP7.65□□□□□ -1.19
NEDD9-208ENST00000504387 EFNA5P52803 228 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms