RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GTF2H3Q13889 308 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TLR1Q15399 786 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SNRNP35Q16560 246 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SETMARQ53H47 684 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM63BQ5T3F8 832 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM109BQ6ICB4 259 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 APOBEC3HQ6NTF7 200 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 IZUMO2Q6UXV1 221 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZCCHC23Q6ZST2 131 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ERMP1Q7Z2K6 904 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KIAA0319LQ8IZA0 1049 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF276Q8N554 614 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC20A1Q8WUM9 679 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ROBO4Q8WZ75 1007 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SEPT8Q92599 483 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 YIPF5Q969M3 257 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PTCD3Q96EY7 689 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 WNK4Q96J92 1243 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM84AQ96KN4 292 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PWWP2AQ96N64 755 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CDK5RAP1Q96SZ6 601 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZBTB18Q99592 522 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MROH8Q9H579 483 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MID2Q9UJV3 735 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 LRFN2Q9ULH4 789 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PLA2G4CQ9UP65 541 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TRAV20A0A0B4J274 112 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MEI4A8MW99 385 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 M0R3G1 203 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF263O14978 683 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KIAA0391O15091 583 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PMPCBO75439 489 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNK2O95069 426 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ATE1O95260 518 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PGM3O95394 542 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PEX11BO96011 259 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ITGB3P05106 788 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CD1EP15812 388 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 BGNP21810 368 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SSTR1P30872 391 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CIITAP33076 1130 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PTPN7P35236 360 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TALDO1P37837 337 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 VHLP40337 213 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 OR3A3P47888 321 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 IREB2P48200 963 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 HMGCS2P54868 508 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 AQP5P55064 265 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SOX8P57073 446 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 RPL10AP62906 217 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ERVK-9P63128 1117 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 DSC2Q02487 901 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CAV1Q03135 178 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MAPK7Q13164 816 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ATP1A4Q13733 1029 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NCOA4Q13772 614 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 BAATQ14032 418 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 DUOXA2Q1HG44 320 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 HSF5Q4G112 596 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PITRM1Q5JRX3 1037 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GLRA4Q5JXX5 417 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TCHHL1Q5QJ38 904 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MARCH8Q5T0T0 291 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SLFN12LQ6IEE8 588 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GPAT2Q6NUI2 795 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 WDR59Q6PJI9 974 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CES3Q6UWW8 571 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NLRC3Q7RTR2 1065 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF571Q7Z3V5 609 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 FRMD5Q7Z6J6 570 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ADCK1Q86TW2 530 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC13A5Q86YT5 568 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CBWD2Q8IUF1 395 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CROCCP3Q8IVE0 287 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GLIS3Q8NEA6 775 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MCPH1Q8NEM0 835 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 POC1BQ8TC44 478 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 LRRN4Q8WUT4 740 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 RUBCNQ92622 972 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZFYVE19Q96K21 471 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CBWD1Q9BRT8 395 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 BBS2Q9BXC9 721 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CADM1Q9BY67 442 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KLHL25Q9H0H3 589 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 AP5M1Q9H0R1 490 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SERINC1Q9NRX5 453 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TOPORSQ9NS56 1045 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZDHHC18Q9NUE0 388 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GIMAP4Q9NUV9 329 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PARVAQ9NVD7 372 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM161AQ9NX61 479 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PSMC3IPQ9P2W1 217 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 VAV3Q9UKW4 847 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ATP11BQ9Y2G3 1177 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MAGED1Q9Y5V3 778 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 RAD54BQ9Y620 910 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KNTC1P50748 2209 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms