RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 TMEM160Q9NX00 188 aa3.49□□□□□ -1.85
GYPB-203ENST00000503255 DDX43Q9NXZ2 648 aaKnown RBP3.49□□□□□ -1.85
GYPB-203ENST00000503255 CNOT7Q9UIV1 285 aaKnown RBP3.49□□□□□ -1.85
GYPB-203ENST00000503255 NACADO15069 1562 aa3.49□□□□□ -1.85
GYPB-203ENST00000503255 RB1CC1Q8TDY2 1594 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 GOLGA6L10A0A0M3HER8 536 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 OR6C68A6NDL8 312 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 SH2D7A6NKC9 451 aaPredicted RBP3.48□□□□□ -1.85
GYPB-203ENST00000503255 FAM157AC9JC47 383 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 SLC25A17O43808 307 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 DHX16O60231 1041 aaKnown RBP3.48□□□□□ -1.85
GYPB-203ENST00000503255 POLBP06746 335 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 ANOS1P23352 680 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 HNF1BP35680 557 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 ARL1P40616 181 aaPredicted RBP3.48□□□□□ -1.85
GYPB-203ENST00000503255 FUT6P51993 359 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 IL13RA2Q14627 380 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 GPR68Q15743 365 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 CALCRLQ16602 461 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 NCAPH2Q6IBW4 605 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 MB21D2Q8IYB1 491 aaPredicted RBP3.48□□□□□ -1.85
GYPB-203ENST00000503255 TNIP2Q8NFZ5 429 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 OR4N2Q8NGD1 307 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 OR13A1Q8NGR1 328 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 RNFT2Q96EX2 444 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 C3orf30Q96M34 536 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 ZNF385AQ96PM9 386 aaKnown RBP3.48□□□□□ -1.85
GYPB-203ENST00000503255 DUX3Q96PT4 197 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 CTDSP1Q9GZU7 261 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 NOX4Q9NPH5 578 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 C9orf78Q9NZ63 289 aaPredicted RBP3.48□□□□□ -1.85
GYPB-203ENST00000503255 OR6C3Q9NZP0 311 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 SLC9A2Q9UBY0 812 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 CNPY2Q9Y2B0 182 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 MYO15BQ96JP2 1530 aa3.48□□□□□ -1.85
GYPB-203ENST00000503255 A0A096LPK6 155 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 IGKV3D-20A0A0C4DH25 116 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 A0A1B0GVC2 190 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 FAM172BPA6NC97 362 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 TSPAN4O14817 238 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 ATP1A1P05023 1023 aaKnown RBP3.47□□□□□ -1.85
GYPB-203ENST00000503255 CHRM4P08173 479 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 CD72P21854 359 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 YWHAQP27348 245 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 MARK3P27448 753 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 CCR5P51681 352 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 TROAPQ12815 778 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 TBX2Q13207 712 aaPredicted RBP3.47□□□□□ -1.85
GYPB-203ENST00000503255 NAA25Q14CX7 972 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 AP5B1Q2VPB7 878 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 FBXO43Q4G163 708 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 JAKMIP3Q5VZ66 844 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 PLEKHA7Q6IQ23 1121 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 ADGRG6Q86SQ4 1221 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 SLC9B2Q86UD5 537 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 TMC8Q8IU68 726 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 ESX1Q8N693 406 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 LSM14AQ8ND56 463 aaKnown RBP3.47□□□□□ -1.85
GYPB-203ENST00000503255 IL17REQ8NFR9 667 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 ARRDC2Q8TBH0 407 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 RAB40AQ8WXH6 277 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 CNOT9Q92600 299 aaKnown RBP3.47□□□□□ -1.85
GYPB-203ENST00000503255 OR1F2PQ96R84 312 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 SEC62Q99442 399 aaKnown RBP3.47□□□□□ -1.85
GYPB-203ENST00000503255 UNC45AQ9H3U1 944 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 MROH8Q9H579 483 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 JMJD4Q9H9V9 463 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 PPP1R14DQ9NXH3 145 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 GRHL1Q9NZI5 618 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 IFT80Q9P2H3 777 aaPredicted RBP3.47□□□□□ -1.85
GYPB-203ENST00000503255 CRYL1Q9Y2S2 319 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 TMEM98Q9Y2Y6 226 aa3.47□□□□□ -1.85
GYPB-203ENST00000503255 A0A0G2JPF8 293 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 GAGE10A6NGK3 116 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 HNRNPCL3B7ZW38 293 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 ZNF587BE7ETH6 402 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 FGF17O60258 216 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 HNRNPCL1O60812 293 aaKnown RBP3.46□□□□□ -1.86
GYPB-203ENST00000503255 IL1AP01583 271 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 PYGLP06737 847 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 HNRNPA1P09651 372 aaKnown RBP eCLIP3.46□□□□□ -1.86
GYPB-203ENST00000503255 HNRNPCL4P0DMR1 293 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 TIMP3P35625 211 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 PIGAP37287 484 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 MTNR1AP48039 350 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 FAM27E3Q08E93 113 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 FOXD4Q12950 439 aaPredicted RBP3.46□□□□□ -1.86
GYPB-203ENST00000503255 NFIL3Q16649 462 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 INTS11Q5TA45 600 aaKnown RBP3.46□□□□□ -1.86
GYPB-203ENST00000503255 MON1AQ86VX9 555 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 TMTC1Q8IUR5 882 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 TSPYL6Q8N831 410 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 WDSUB1Q8N9V3 476 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 DNAAF1Q8NEP3 725 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 ZCCHC10Q8TBK6 192 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 HSPH1Q92598 858 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 HTRA1Q92743 480 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 ANKRD9Q96BM1 317 aaPredicted RBP3.46□□□□□ -1.86
GYPB-203ENST00000503255 HVCN1Q96D96 273 aa3.46□□□□□ -1.86
GYPB-203ENST00000503255 PPM1MQ96MI6 270 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms