RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ARL4AP40617 200 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 HK3P52790 923 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 MAXP61244 160 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 PIGHQ14442 188 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-204ENST00000503215 NFATC4Q14934 902 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 ACAP1Q15027 740 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 NR0B2Q15466 257 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 TMCO4Q5TGY1 634 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 ALKBH5Q6P6C2 394 aaKnown RBP16.34■□□□□ 0.21
SCLT1-204ENST00000503215 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 LZTR1Q8N653 840 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 NIPA2Q8N8Q9 360 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 ABCG4Q9H172 646 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 USP29Q9HBJ7 922 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 NOD2Q9HC29 1040 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 SIRPGQ9P1W8 387 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 NENFQ9UMX5 172 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 RAI2Q9Y5P3 530 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 ATRXP46100 2492 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 ANKRD36A6QL64 1941 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 A0A0U1RQS6 177 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 PMS2P1A4D2B8 440 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 TMEM202A6NGA9 273 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 USP12O75317 370 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 ANXA6P08133 673 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 CASP14P31944 242 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 PEX5P50542 639 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 ZNF135P52742 658 aaPredicted RBP16.33■□□□□ 0.2
SCLT1-204ENST00000503215 SRP54P61011 504 aaKnown RBP16.33■□□□□ 0.2
SCLT1-204ENST00000503215 TPM4P67936 248 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 AGERQ15109 404 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 SOWAHCQ53LP3 525 aaPredicted RBP16.33■□□□□ 0.2
SCLT1-204ENST00000503215 CCDC122Q5T0U0 273 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 C6orf132Q5T0Z8 1188 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 DPPA4Q7L190 304 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 SFTPA2Q8IWL1 248 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 LRRN4Q8WUT4 740 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 TEKT4Q8WW24 435 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 OR1E3Q8WZA6 343 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 PDXPQ96GD0 296 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 BBC3Q96PG8 261 aaPredicted RBP16.33■□□□□ 0.2
SCLT1-204ENST00000503215 SMIM14Q96QK8 99 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 LGR4Q9BXB1 951 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 MRPL40Q9NQ50 206 aaKnown RBP16.33■□□□□ 0.2
SCLT1-204ENST00000503215 GULP1Q9UBP9 304 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 B4GALT6Q9UBX8 382 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 IP6K2Q9UHH9 426 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.2
SCLT1-204ENST00000503215 IGSF10Q6WRI0 2623 aa16.33■□□□□ 0.2
SCLT1-204ENST00000503215 GOLGA6L19H0YKK7 550 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 TOR1BO14657 336 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 HTRA2O43464 458 aaPredicted RBP16.32■□□□□ 0.2
SCLT1-204ENST00000503215 ARSEP51690 589 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 AP1S1P61966 158 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 TRAF2Q12933 501 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 IHHQ14623 411 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 ISXQ2M1V0 245 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 KYQ8NBH2 561 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 PCDH19Q8TAB3 1148 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 TBATAQ96M53 351 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 ZNF599Q96NL3 588 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 DEPDC7Q96QD5 511 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
SCLT1-204ENST00000503215 FGF22Q9HCT0 170 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 RABGEF1Q9UJ41 708 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 PTPRQQ9UMZ3 2332 aa16.32■□□□□ 0.2
SCLT1-204ENST00000503215 BPTFQ12830 3046 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 COL27A1Q8IZC6 1860 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-204ENST00000503215 TMEM110-MUSTN1A8MSY1 372 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 RASGRP1O95267 797 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 MAP3K6O95382 1288 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 ELFN1P0C7U0 828 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 GJC1P36383 396 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 SSR1P43307 286 aaKnown RBP16.31■□□□□ 0.2
SCLT1-204ENST00000503215 RENBPP51606 427 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 CDH6P55285 790 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 TAS2R40P59535 323 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 MTM1Q13496 603 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 ZNF235Q14590 738 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 FAM182AQ5T1J6 154 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 RFLNAQ6ZTI6 216 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 SNIP1Q8TAD8 396 aaKnown RBP16.31■□□□□ 0.2
SCLT1-204ENST00000503215 PDCD6IPQ8WUM4 868 aaKnown RBP16.31■□□□□ 0.2
SCLT1-204ENST00000503215 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 FGF11Q92914 225 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 ATXN7L3BQ96GX2 97 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 WDR92Q96MX6 357 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 NUDCD1Q96RS6 583 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 MGME1Q9BQP7 344 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 KLQ9UEF7 1012 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 PADI4Q9UM07 663 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 KIF26BQ2KJY2 2108 aa16.31■□□□□ 0.2
SCLT1-204ENST00000503215 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 MYO1FO00160 1098 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 MFSD11O43934 449 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 CTSEP14091 401 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 GABREP78334 506 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms