RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 LBRQ14739 615 aaKnown RBP11.65□□□□□ -0.54
USP46-204ENST00000503060 HECTD3Q5T447 861 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 RFWD3Q6PCD5 774 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 CFAP52Q8N1V2 620 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 RAB3IPQ96QF0 476 aaPredicted RBP11.65□□□□□ -0.54
USP46-204ENST00000503060 TUBB6Q9BUF5 446 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 ARL8BQ9NVJ2 186 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 LNPEPQ9UIQ6 1025 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 TLK1Q9UKI8 766 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 DNAJC16Q9Y2G8 782 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 STK38LQ9Y2H1 464 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 BRCA2P51587 3418 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 COL4A6Q14031 1691 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 TTC24A2A3L6 582 aaPredicted RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 TRAFD1O14545 582 aaPredicted RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 HNRNPCL1O60812 293 aaKnown RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 ATP6V1G2O95670 118 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 SLC1A2P43004 574 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 POLD2P49005 469 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 SLC11A2P49281 568 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 SP140Q13342 867 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 MSLNQ13421 630 aaPredicted RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 FAM91A1Q658Y4 838 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 KLHDC10Q6PID8 442 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 RAPH1Q70E73 1250 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 TTC7BQ86TV6 843 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 ALYREFQ86V81 257 aaKnown RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 SLC41A1Q8IVJ1 513 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 TNS4Q8IZW8 715 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 C2CD4AQ8NCU7 369 aaPredicted RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 OR6Y1Q8NGX8 325 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 SGCDQ92629 289 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 UTP4Q969X6 686 aaKnown RBP11.65□□□□□ -0.55
USP46-204ENST00000503060 VWCEQ96DN2 955 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 SIKE1Q9BRV8 207 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 NMRAL1Q9HBL8 299 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 TBX21Q9UL17 535 aa11.65□□□□□ -0.55
USP46-204ENST00000503060 G3V2L1 256 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PHGDHO43175 533 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 COCHO43405 550 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PRMT3O60678 531 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ABLIM3O94929 683 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 SOD2P04179 222 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 SAT1P21673 171 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PTPN4P29074 926 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 MAGEA10P43363 369 aaPredicted RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 NEK2P51955 445 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 TPD52P55327 224 aaPredicted RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 DMPKQ09013 629 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ITGA9Q13797 1035 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 TSTD2Q5T7W7 516 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ZNF470Q6ECI4 717 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 NEPROQ6NW34 567 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.64□□□□□ -0.55
USP46-204ENST00000503060 ZNF461Q8TAF7 563 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PIWIL2Q8TC59 973 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 PTCD3Q96EY7 689 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 NSL1Q96IY1 281 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 SORT1Q99523 831 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 SEMA3CQ99985 751 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 C1QTNF1Q9BXJ1 281 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PDFQ9HBH1 243 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 CYP4F11Q9HBI6 524 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 TRPM5Q9NZQ8 1165 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 HSFX1Q9UBD0 423 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 UXTQ9UBK9 157 aaPredicted RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 FBXO5Q9UKT4 447 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 WDR37Q9Y2I8 494 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 LOC285095A0A1B0GVY8 99 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 FAM95CA0A1B0GW59 222 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PAPSS2O95340 614 aaPredicted RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 ATP5BP06576 529 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 APOA4P06727 396 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ATXN1LP0C7T5 689 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 ABCE1P61221 599 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 DSG1Q02413 1049 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ZNF235Q14590 738 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 SIRPB2Q5JXA9 342 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ATG14Q6ZNE5 492 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PPP4R1Q8TF05 950 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 STON2Q8WXE9 905 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 PLD4Q96BZ4 506 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 MYRFLQ96LU7 910 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 TSNARE1Q96NA8 513 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ZNF599Q96NL3 588 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 NMUR2Q9GZQ4 415 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 POLR1EQ9GZS1 481 aaKnown RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 MAGEH1Q9H213 219 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 NOD2Q9HC29 1040 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 BAIAP2L1Q9UHR4 511 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 MID2Q9UJV3 735 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 YIPF1Q9Y548 306 aa11.64□□□□□ -0.55
USP46-204ENST00000503060 ZFP37Q9Y6Q3 630 aaPredicted RBP11.64□□□□□ -0.55
USP46-204ENST00000503060 MIA3Q5JRA6 1907 aa11.63□□□□□ -0.55
USP46-204ENST00000503060 H3BNC9 293 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms