RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PIGNO95427 931 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 ZNF24P17028 368 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 LPOP22079 712 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 EIF2B2P49770 351 aaKnown RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 ERFP50548 548 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 AP1S1P61966 158 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 USP46P62068 366 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 MAD2L1Q13257 205 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 PRR23BQ6ZRT6 265 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 LGI2Q8N0V4 545 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 CLYBLQ8N0X4 340 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 RHEBL1Q8TAI7 183 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 LZICQ8WZA0 190 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 NDRG1Q92597 394 aaKnown RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 PPP2R3CQ969Q6 453 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 SLC7A6OSQ96CW6 309 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 MFSD3Q96ES6 412 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 ZNF558Q96NG5 402 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 C2orf49Q9BVC5 232 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 NUSAP1Q9BXS6 441 aaKnown RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 CADM1Q9BY67 442 aaKnown RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 GIMAP4Q9NUV9 329 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 MARCOQ9UEW3 520 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 SFMBT1Q9UHJ3 866 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 TRMT6Q9UJA5 497 aaKnown RBP7.44□□□□□ -1.22
PDGFC-203ENST00000502773 APPL1Q9UKG1 709 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 NDUFAF1Q9Y375 327 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 NME7Q9Y5B8 376 aa7.44□□□□□ -1.22
PDGFC-203ENST00000502773 SLC38A8A6NNN8 435 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 E5RI56 91 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CD9P21926 228 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 GRK4P32298 578 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CD86P42081 329 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MAPK9P45984 424 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 DSG1Q02413 1049 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 GNA12Q03113 381 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MTM1Q13496 603 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 SLC5A9Q2M3M2 681 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 PAN2Q504Q3 1202 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MS4A13Q5J8X5 152 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 UBAP2Q5T6F2 1119 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 OTUD1Q5VV17 481 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CLEC14AQ86T13 490 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 SLC25A41Q8N5S1 370 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CPSF7Q8N684 471 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ICA1LQ8NDH6 482 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 TRPV1Q8NER1 839 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 OR4L1Q8NH43 312 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MRPS31Q92665 395 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 BHMTQ93088 406 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CATSPER2Q96P56 530 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ZBTB18Q99592 522 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 WDR83Q9BRX9 315 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CCDC106Q9BWC9 280 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MUC3BQ9H195 1237 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 WDR37Q9Y2I8 494 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 PCDHGA4Q9Y5G9 962 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ENPP3O14638 875 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 UBDO15205 165 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 KDELR3O43731 214 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 RHOBTB1O94844 696 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 TPH1P17752 444 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 TFEBP19484 476 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 NMBRP28336 390 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ADRA1AP35348 466 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ACTR3P61158 418 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CNGA3Q16281 694 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 PCSK7Q16549 785 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ANKS6Q68DC2 871 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 LRRC74BQ6ZQY2 392 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ULK2Q8IYT8 1036 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 GALNT15Q8N3T1 639 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 AADATQ8N5Z0 425 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 SLC43A3Q8NBI5 491 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 OR10T2Q8NGX3 314 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 TRIB3Q96RU7 358 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 GATA5Q9BWX5 397 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 COG4Q9H9E3 785 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 PRDM5Q9NQX1 630 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MAPRE3Q9UPY8 281 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 RBMX2Q9Y388 322 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 SOBPA7XYQ1 873 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MATN2O00339 956 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CD3EAPO15446 510 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ZSCAN9O15535 394 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CCNT2O60583 730 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 USP12O75317 370 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 FCGR1AP12314 374 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ZNF7P17097 686 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ME2P23368 584 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CD68P34810 354 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 GRIA1P42261 906 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CRADDP78560 199 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 KLF10Q13118 480 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 INPP5AQ14642 412 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 TRIM71Q2Q1W2 868 aaKnown RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 INO80DQ53TQ3 878 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 METTL2BQ6P1Q9 378 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms