RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 NCAPGQ9BPX3 1015 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 STK33Q9BYT3 514 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 SEMA6CQ9H3T2 930 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 SUV39H2Q9H5I1 410 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 DGKBQ9Y6T7 804 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 SDK2Q58EX2 2172 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 ARHGEF17Q96PE2 2063 aaPredicted RBP16.16■□□□□ 0.18
MUC1-220ENST00000498431 B4DGG1 531 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 PES1O00541 588 aaKnown RBP16.16■□□□□ 0.18
MUC1-220ENST00000498431 GFPT2O94808 682 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
MUC1-220ENST00000498431 SUOXP51687 545 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 CDR2Q01850 454 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 MTM1Q13496 603 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 HLTFQ14527 1009 aaKnown RBP eCLIP16.16■□□□□ 0.18
MUC1-220ENST00000498431 CLCA4Q14CN2 919 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 C16orf72Q14CZ0 275 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 C14orf28Q4W4Y0 310 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 CLEC17AQ6ZS10 378 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 CAMK1DQ8IU85 385 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 MLKLQ8NB16 471 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 JPH3Q8WXH2 748 aaPredicted RBP16.16■□□□□ 0.18
MUC1-220ENST00000498431 TMEM168Q9H0V1 697 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 RDH14Q9HBH5 336 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 SEPT10Q9P0V9 454 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 LRIT1Q9P2V4 623 aa16.16■□□□□ 0.18
MUC1-220ENST00000498431 J3KR12 359 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 CREB3O43889 395 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 RGRP47804 291 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 RALGDSQ12967 914 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 COLEC12Q5KU26 742 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 PHF19Q5T6S3 580 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 SPECC1LQ69YQ0 1117 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 SLFN11Q7Z7L1 901 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 DNAAF5Q86Y56 855 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 FAM114A1Q8IWE2 563 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 PELI3Q8N2H9 469 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 OR56A4Q8NGH8 313 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 ATL2Q8NHH9 583 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 HCAR2Q8TDS4 363 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 CMKLR1Q99788 373 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 SEMA3CQ99985 751 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 FUCA2Q9BTY2 467 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 LGR4Q9BXB1 951 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 GANQ9H2C0 597 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 PDFQ9HBH1 243 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 UBA2Q9UBT2 640 aaPredicted RBP16.15■□□□□ 0.18
MUC1-220ENST00000498431 ATP8A1Q9Y2Q0 1164 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 DOPEY2Q9Y3R5 2298 aa16.15■□□□□ 0.18
MUC1-220ENST00000498431 A0A1W2PQC6 194 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 B4GAT1O43505 415 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 RECQL5O94762 991 aaPredicted RBP16.14■□□□□ 0.17
MUC1-220ENST00000498431 KRT3P12035 628 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 CCL4P13236 92 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 PNLIPP16233 465 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 GM2AP17900 193 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 KLK7P49862 253 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 ARSDP51689 593 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 YBEYP58557 167 aaPredicted RBP16.14■□□□□ 0.17
MUC1-220ENST00000498431 KIAA1024LP59773 190 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 B4GALNT1Q00973 533 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 ARHGEF7Q14155 803 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 DPCR1Q3MIW9 517 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 PARP15Q460N3 678 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 ERAP2Q6P179 960 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 BRAT1Q6PJG6 821 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 WDR59Q6PJI9 974 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 UMODL1-AS1Q8N2C9 162 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 PMEPA1Q969W9 287 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 TMEM159Q96B96 161 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 DPEP2Q9H4A9 486 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 CYP4F12Q9HCS2 524 aa16.14■□□□□ 0.17
MUC1-220ENST00000498431 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 CACNB4O00305 520 aaPredicted RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 CCP110O43303 1012 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 NUDT21O43809 227 aaKnown RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 UNGP13051 313 aaPredicted RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 GPD1P21695 349 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 MAZP56270 477 aaKnown RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 OR1D5P58170 312 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 AMZ1Q400G9 498 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 EFHC2Q5JST6 749 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 SCYL2Q6P3W7 929 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 LIPIQ6XZB0 460 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 ZNF574Q6ZN55 896 aaPredicted RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 ZSCAN1Q8NBB4 408 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 RCBTB1Q8NDN9 531 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 ZNF641Q96N77 438 aaPredicted RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 NUDT22Q9BRQ3 303 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 LRRC19Q9H756 370 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 SPATS2LQ9NUQ6 558 aaKnown RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 FZD10Q9ULW2 581 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 PCDHB11Q9Y5F2 797 aa16.13■□□□□ 0.17
MUC1-220ENST00000498431 ZFC3H1O60293 1989 aaKnown RBP16.13■□□□□ 0.17
MUC1-220ENST00000498431 SPENQ96T58 3664 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms