RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CCKBRP32239 447 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 CLCN5P51795 746 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 HSPA2P54652 639 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 NR1H2P55055 460 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 RPP30P78346 268 aaKnown RBP2.98□□□□□ -1.93
RIF1-212ENST00000498041 TAF11Q15544 211 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 GPR68Q15743 365 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 BAK1Q16611 211 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ZNF667Q5HYK9 610 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 EFHC1Q5JVL4 640 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 PRAMEF19Q5SWL8 479 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 SERTAD4-AS1Q5TG53 156 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 CES5AQ6NT32 575 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 FJX1Q86VR8 437 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 TMTC1Q8IUR5 882 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 SFTPA2Q8IWL1 248 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ADHFE1Q8IWW8 467 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 CLIP4Q8N3C7 705 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 PLD5Q8N7P1 536 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ADAMTS15Q8TE58 950 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 FAM216AQ8WUB2 273 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 TRIB2Q92519 343 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 HTRA1Q92743 480 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ZBTB10Q96DT7 871 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 MED30Q96HR3 178 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 APOPT1Q96IL0 206 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 TESK2Q96S53 571 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 SLC25A33Q9BSK2 321 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 CLK4Q9HAZ1 481 aaKnown RBP2.98□□□□□ -1.93
RIF1-212ENST00000498041 WASH6PQ9NQA3 447 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 SNTG1Q9NSN8 517 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 KIAA1456Q9P272 454 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 PDP2Q9P2J9 529 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 SLC25A10Q9UBX3 287 aaPredicted RBP2.98□□□□□ -1.93
RIF1-212ENST00000498041 ZNF580Q9UK33 172 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 AGO1Q9UL18 857 aaKnown RBP2.98□□□□□ -1.93
RIF1-212ENST00000498041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.98□□□□□ -1.93
RIF1-212ENST00000498041 SLC45A1Q9Y2W3 748 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 PAM16Q9Y3D7 125 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 NPATQ14207 1427 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 PLXNC1O60486 1568 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 GLI2P10070 1586 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 IFT172Q9UG01 1749 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 CCDC7Q96M83 1385 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ABCC3O15438 1527 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ASXL1Q8IXJ9 1541 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 KIF1BO60333 1816 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 PPLO60437 1756 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 DEPDC5O75140 1603 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 PTPRMP28827 1452 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 SHANK2Q9UPX8 1470 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 HECW2Q9P2P5 1572 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 ERBINQ96RT1 1412 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 KLRF2D3W0D1 207 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TNPO2O14787 897 aaKnown RBP2.97□□□□□ -1.93
RIF1-212ENST00000498041 TSPAN4O14817 238 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 NPHP1O15259 732 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 KCNJ13O60928 360 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 SERPINI2O75830 405 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 MTA2O94776 668 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 GALTP07902 379 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 COX7A2P14406 83 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 POU1F1P28069 291 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TNFRSF8P28908 595 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 C21orf33P30042 268 aaPredicted RBP2.97□□□□□ -1.93
RIF1-212ENST00000498041 FMO4P31512 558 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 RPL3P39023 403 aaKnown RBP2.97□□□□□ -1.93
RIF1-212ENST00000498041 CXCR3P49682 368 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 MXI1P50539 228 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 HDAC4P56524 1084 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 DSCR9P59020 149 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 UFM1P61960 85 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 GALNT2Q10471 571 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 VEPH1Q14D04 833 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 ARHGEF6Q15052 776 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 PLCB4Q15147 1175 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 HLFQ16534 295 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 SOWAHAQ2M3V2 549 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 ZNF585BQ52M93 769 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TYW3Q6IPR3 259 aaKnown RBP2.97□□□□□ -1.93
RIF1-212ENST00000498041 TMEM81Q6P7N7 255 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 KLHL24Q6TFL4 600 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 NEK10Q6ZWH5 1172 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 RRM2BQ7LG56 351 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 GPAT4Q86UL3 456 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 CCDC105Q8IYK2 499 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 KIAA2013Q8IYS2 634 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 FAM9BQ8IZU0 186 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 ESX1Q8N693 406 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 GJC3Q8NFK1 279 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 NUDCD2Q8WVJ2 157 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 SNAPC3Q92966 411 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 ZC3HAV1LQ96H79 300 aaKnown RBP2.97□□□□□ -1.93
RIF1-212ENST00000498041 TXNDC15Q96J42 360 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TBATAQ96M53 351 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TM6SF1Q9BZW5 370 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TTYH1Q9H313 450 aaPredicted RBP2.97□□□□□ -1.93
RIF1-212ENST00000498041 PANK3Q9H999 370 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 CD93Q9NPY3 652 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 OR6C3Q9NZP0 311 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms