RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 XPAP23025 273 aaPredicted RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 CES1P23141 567 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 CD38P28907 300 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ATXN3P54252 364 aaPredicted RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 POLR2LP62875 67 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 DSC2Q02487 901 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 TRAF2Q12933 501 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 FGL2Q14314 439 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 KIF19Q2TAC6 998 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 TMEM52BQ4KMG9 183 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ERAP2Q6P179 960 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ADAT2Q7Z6V5 191 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 IQCHQ86VS3 1027 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 MINDY1Q8N5J2 469 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 CNTD1Q8N815 330 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 MFSD2AQ8NA29 543 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 OR2I1PQ8NGU4 316 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ARRDC2Q8TBH0 407 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 UBE2Q2Q8WVN8 375 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ASB12Q8WXK4 309 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 KLK6Q92876 244 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 FEM1CQ96JP0 617 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.61e-11■■■■■ 42.5
ERCC8-208ENST00000497892 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 C1QTNF2Q9BXJ5 285 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 HEMGNQ9BXL5 484 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 SLC17A9Q9BYT1 436 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 LZTFL1Q9NQ48 299 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ANKRD6Q9Y2G4 727 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 TTLL3Q9Y4R7 772 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 PCDHGC4Q9Y5F7 938 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 CNOT1A5YKK6 2376 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 IGLON5A6NGN9 336 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 NEBLO76041 1014 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 PGLSO95336 258 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CER1O95813 267 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CPP00450 1065 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 JCHAINP01591 159 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 AKT2P31751 481 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CETN2P41208 172 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CTSKP43235 329 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 ITKQ08881 620 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 OVGP1Q12889 678 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 RALGDSQ12967 914 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 IHHQ14623 411 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 SLC45A4Q5BKX6 768 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 AADACL2Q6P093 401 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 PAF1Q8N7H5 531 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 DENND6BQ8NEG7 585 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CXorf40AQ8TE69 158 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 TFB1MQ8WVM0 346 aaKnown RBP11.31□□□□□ -0.6
ERCC8-208ENST00000497892 SKA1Q96BD8 255 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 HAUS1Q96CS2 278 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 KLF6Q99612 283 aaPredicted RBP11.31□□□□□ -0.6
ERCC8-208ENST00000497892 MYOCQ99972 504 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 WRAP53Q9BUR4 548 aaKnown RBP11.31□□□□□ -0.6
ERCC8-208ENST00000497892 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 FZD3Q9NPG1 666 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
ERCC8-208ENST00000497892 PPP2R2CQ9Y2T4 447 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 PCDHB9Q9Y5E1 797 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 SNX11Q9Y5W9 270 aa11.31□□□□□ -0.6
ERCC8-208ENST00000497892 CFAP69A5D8W1 941 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 HACD1B0YJ81 288 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 TLR4O00206 839 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 TM4SF5O14894 197 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 RAD51BO15315 384 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 MTSS1O43312 755 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 FZD6O60353 706 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 MMP20O60882 483 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 TM7SF2O76062 418 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 TJP3O95049 919 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 PAK4O96013 591 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 PRKCGP05129 697 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ZNF883P0CG24 379 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ID4P47928 161 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 C21orf59P57076 290 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 NXPH1P58417 271 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 NIPAL4Q0D2K0 466 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 SGCGQ13326 291 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 XRCC4Q13426 336 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 PUM1Q14671 1186 aaKnown RBP eCLIP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 STAT4Q14765 748 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 NOMO1Q15155 1222 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 HLA-BQ31612 363 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ARMC12Q5T9G4 340 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 CCDC181Q5TID7 509 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
ERCC8-208ENST00000497892 GCNT7Q6ZNI0 430 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
ERCC8-208ENST00000497892 ABI3BPQ7Z7G0 1075 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms