RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FAM214AQ32MH5 1076 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SMG8Q8ND04 991 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SPPL2BQ8TCT7 592 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 TOP1MTQ969P6 601 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 UHRF1Q96T88 793 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 HOXD1Q9GZZ0 328 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 CD320Q9NPF0 282 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 MORF4L1Q9UBU8 362 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 ARPC2O15144 300 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SLC22A2O15244 555 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ABCB7O75027 752 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 MAGEA6P43360 314 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 VAC14Q08AM6 782 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 RETREG3Q86VR2 466 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 TP53INP2Q8IXH6 220 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ELMOD1Q8N336 334 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ZNF641Q96N77 438 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CHID1Q9BWS9 393 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ELOVL4Q9GZR5 314 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 LRRC40Q9H9A6 602 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SPON1Q9HCB6 807 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 TNFRSF12AQ9NP84 129 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CD300AQ9UGN4 299 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 UGT2A1Q9Y4X1 527 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 EIF2S1P05198 315 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CYP3A5P20815 502 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CCT8P50990 548 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 PLIN5Q00G26 463 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CSHL1Q14406 222 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 FAM83EQ2M2I3 478 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 C4orf22Q6V702 233 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SYTL1Q8IYJ3 562 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 OR7G1Q8NGA0 311 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 MCRS1Q96EZ8 462 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ARMC1Q9NVT9 282 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CENPFP49454 3210 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 TIMM44O43615 452 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 ENDOD1O94919 500 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 AGXTP21549 392 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 PSMB9P28065 219 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 NAMPTP43490 491 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CTBP1Q13363 440 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 COLEC12Q5KU26 742 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 XAF1Q6GPH4 301 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SPATC1Q76KD6 591 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CERKQ8TCT0 537 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 GPN2Q9H9Y4 310 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 SLCO3A1Q9UIG8 710 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 USP22Q9UPT9 525 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 PTGDR2Q9Y5Y4 395 aa13.12□□□□□ -0.31
GAPVD1-220ENST00000497580 H0YCG3 227 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 NUAK1O60285 661 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ATG7O95352 703 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 BDNFP23560 247 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 TGFBR1P36897 503 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 BCAT1P54687 386 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 PGM5Q15124 567 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 CATSPEREQ5SY80 951 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 RALGPS2Q86X27 583 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 AFAP1L2Q8N4X5 818 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 TUBA1CQ9BQE3 449 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 MTF2Q9Y483 593 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 A0A0J9YYE9 177 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 MFSD11O43934 449 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 NOBOXO60393 691 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 GSNP06396 782 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 SBK3P0C264 359 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 GTF2E2P29084 291 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 GJA9P57773 515 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 SPANXN3Q5MJ09 141 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 WDR45BQ5MNZ6 344 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ADGRG5Q8IZF4 528 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 TTC30BQ8N4P2 665 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 PNPLA1Q8N8W4 532 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms