RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PORP16435 677 aaPredicted RBP4.17□□□□□ -1.74
SMC4-225ENST00000497203 TNFRSF1BP20333 461 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 EDN2P20800 178 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 RAD52P43351 418 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 ME1P48163 572 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 CLCN5P51795 746 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 NLRP5P59047 1200 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 FAM27E3Q08E93 113 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 FGFBP1Q14512 234 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 LPIN1Q14693 890 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 DRAP1Q14919 205 aaPredicted RBP4.17□□□□□ -1.74
SMC4-225ENST00000497203 ARHGEF6Q15052 776 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 KRT24Q2M2I5 525 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 ZNF260Q3ZCT1 412 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 LEXMQ3ZCV2 418 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 PLEKHS1Q5SXH7 462 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 C16orf54Q6UWD8 224 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 TRILQ7L0X0 811 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 SZRD1Q7Z422 152 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 PATL1Q86TB9 770 aaKnown RBP4.17□□□□□ -1.74
SMC4-225ENST00000497203 PALB2Q86YC2 1186 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 TDRPQ86YL5 185 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 TEX11Q8IYF3 940 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 TAGAPQ8N103 731 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 SRBD1Q8N5C6 995 aaKnown RBP4.17□□□□□ -1.74
SMC4-225ENST00000497203 TMEM163Q8TC26 289 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 SNAPC3Q92966 411 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 TMEM18Q96B42 140 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 MMABQ96EY8 250 aaPredicted RBP4.17□□□□□ -1.74
SMC4-225ENST00000497203 PGAM5Q96HS1 289 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 FEM1CQ96JP0 617 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 SLITRK1Q96PX8 696 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 LHPPQ9H008 270 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 KLHL31Q9H511 634 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 PLK2Q9NYY3 685 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 ABI3Q9P2A4 366 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 PCDHA12Q9UN75 941 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 COG5Q9UP83 839 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 SESN1Q9Y6P5 492 aa4.17□□□□□ -1.74
SMC4-225ENST00000497203 A0A1W2PQF6 199 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 FRMD3A2A2Y4 597 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 AGAP14A8MT82 685 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 A8MZ25 164 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 SNAP23O00161 211 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CHL1O00533 1208 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 AHCYL1O43865 530 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ATG13O75143 517 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CLDN7O95471 211 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 STARD3NLO95772 234 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 MMP2P08253 660 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 FGF2P09038 288 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 PSG1P11464 419 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ETFAP13804 333 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ZNF182P17025 639 aaPredicted RBP4.16□□□□□ -1.74
SMC4-225ENST00000497203 TMEM11P17152 192 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CHRNB2P17787 502 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CD58P19256 250 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 MYF6P23409 242 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CHATP28329 748 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 HADHAP40939 763 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 RASSF2P50749 326 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 F2RL1P55085 397 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CDH8P55286 799 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 TMPRSS3P57727 454 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 TFAP4Q01664 338 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CEBPZQ03701 1054 aaKnown RBP4.16□□□□□ -1.74
SMC4-225ENST00000497203 CAPSQ13938 189 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ALG11Q2TAA5 492 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 USP41Q3LFD5 358 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ESCO2Q56NI9 601 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 Q5PR19 223 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 PRAMEF19Q5SWL8 479 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ASPHD1Q5U4P2 390 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 TMEM71Q6P5X7 295 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 CHST9Q7L1S5 443 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 SFTPA2Q8IWL1 248 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 MMP21Q8N119 569 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 TEX45Q8NA69 505 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 LPAR1Q92633 364 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 ARHGEF26Q96DR7 871 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 PABPC5Q96DU9 382 aaKnown RBP4.16□□□□□ -1.74
SMC4-225ENST00000497203 C1orf74Q96LT6 269 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 WDFY2Q96P53 400 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 GFM1Q96RP9 751 aaKnown RBP4.16□□□□□ -1.74
SMC4-225ENST00000497203 WDR77Q9BQA1 342 aaPredicted RBP4.16□□□□□ -1.74
SMC4-225ENST00000497203 POLR1BQ9H9Y6 1135 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 MAGEE1Q9HCI5 957 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 POT1Q9NUX5 634 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 LSM4Q9Y4Z0 139 aaKnown RBP4.16□□□□□ -1.74
SMC4-225ENST00000497203 SNX8Q9Y5X2 465 aa4.16□□□□□ -1.74
SMC4-225ENST00000497203 NDUFB4O95168 129 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 NDUFB8O95169 186 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ITGAXP20702 1163 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 AGAP20933 346 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 MCM3P25205 808 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 DCTDP32321 178 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 SHMT1P34896 483 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 PPP3CCP48454 512 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 SNX16P57768 344 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms