RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 hCG_1807616A0A1W2PRN6 198 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 FRMD3A2A2Y4 597 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 PTGES3LE9PB15 166 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 HSPB6O14558 160 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 VILLO15195 856 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 FIBPO43427 364 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 ATG13O75143 517 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 EIF2S1P05198 315 aaKnown RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 CD63P08962 238 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 CHRNB1P11230 501 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 ALOX12P18054 663 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 MCCP23508 829 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 SLC16A2P36021 539 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 CLCN5P51795 746 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 CUL4AQ13619 759 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 ACVR2BQ13705 512 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 FRG1Q14331 258 aaKnown RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 ALG10Q5BKT4 473 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 ALG10BQ5I7T1 473 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 CXorf66Q5JRM2 361 aaPredicted RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 ZNF324BQ6AW86 544 aaPredicted RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 FBXO46Q6PJ61 603 aaPredicted RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 GSG1LQ6UXU4 331 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 SERPINA11Q86U17 422 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 LURAP1LQ8IV03 231 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 NR4A3Q92570 626 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 GTF3C6Q969F1 213 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 FAM120BQ96EK7 910 aaKnown RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 PPP1R13BQ96KQ4 1090 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 NLRP4Q96MN2 994 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 BBS4Q96RK4 519 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 YME1L1Q96TA2 773 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 TMEM204Q9BSN7 226 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 MXD3Q9BW11 206 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 LHPPQ9H008 270 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 MAP6D1Q9H9H5 199 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 PLSCR4Q9NRQ2 329 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 HCFC1R1Q9NWW0 138 aa3.88□□□□□ -1.79
CLK1-214ENST00000496205 CNOT8Q9UFF9 292 aaKnown RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 ZNF215Q9UL58 517 aaPredicted RBP3.88□□□□□ -1.79
CLK1-214ENST00000496205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.88□□□□□ -1.79
CLK1-214ENST00000496205 A0A0U1RQG5 324 aaPredicted RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 DPPA5A6NC42 116 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 A8MZ25 164 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 ZNF814B7Z6K7 855 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 KLRF2D3W0D1 207 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 F8W810 466 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 TMCC2O75069 709 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 CCNDBP1O95273 360 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 TFP02787 698 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 LCKP06239 509 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 TUBBP07437 444 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 AKR1B1P15121 316 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 IL7RP16871 459 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 ZNF8P17098 575 aaPredicted RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 DCTDP32321 178 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 SHMT1P34896 483 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 ARL1P40616 181 aaPredicted RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 GNAQP50148 359 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 YWHAZP63104 245 aaKnown RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 CAPSQ13938 189 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 CCNG2Q16589 344 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 ESCO2Q56NI9 601 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 TTC39AQ5SRH9 613 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 MANEAQ5SRI9 462 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 NUGGCQ68CJ6 796 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 ISM2Q6H9L7 571 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 KLHL35Q6PF15 583 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 TSSK4Q6SA08 328 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 KLHL24Q6TFL4 600 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 SLC35F3Q8IY50 421 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 OR8H2Q8N162 312 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 HORMAD2Q8N7B1 307 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 GPT2Q8TD30 523 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 WFIKKN2Q8TEU8 576 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 C1orf74Q96LT6 269 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 WDR83Q9BRX9 315 aaKnown RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 C1QTNF5Q9BXJ0 243 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 KIF9Q9HAQ2 790 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 FBRSL1Q9HCM7 1045 aaKnown RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 RAP2CQ9Y3L5 183 aa3.87□□□□□ -1.79
CLK1-214ENST00000496205 LSM4Q9Y4Z0 139 aaKnown RBP3.87□□□□□ -1.79
CLK1-214ENST00000496205 BCAT2O15382 392 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 RNMTO43148 476 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 TLX3O43711 291 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 ADRB2P07550 413 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 CSH1P0DML2 217 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 CSH2P0DML3 217 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 PTPN2P17706 415 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 ARRB2P32121 409 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 PPARGP37231 505 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 PPP3CCP48454 512 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 COMPP49747 757 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 CLCN3P51790 818 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 CLNS1AP54105 237 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 F2RL1P55085 397 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 NAP1L1P55209 391 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 GAD2Q05329 585 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 CSTF3Q12996 717 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms