RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	OR14C36	Q8NHC7	312 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	NELL1	Q92832	810 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	EID2B	Q96D98	161 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	RMDN1	Q96DB5	314 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	ARNT2	Q9HBZ2	717 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	WSB2	Q9NYS7	404 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	FZD4	Q9ULV1	537 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	TPX2	Q9ULW0	747 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	BPTF	Q12830	3046 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	PRR23A	A6NEV1	266 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CAPN8	A6NHC0	703 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	AVIL	O75366	819 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	EPO	P01588	193 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	RHOXF2B	P0C7M4	288 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	SP9	P0CG40	484 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	GM2A	P17900	193 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	HLA-DPA1	P20036	260 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CA4	P22748	312 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	LMAN1	P49257	510 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	EPHB1	P54762	984 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	FAM193A	P78312	1265 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CRTC1	Q6UUV9	634 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	KBTBD6	Q86V97	674 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CAND1	Q86VP6	1230 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	WDR5B	Q86VZ2	330 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPIL6	Q8IXY8	311 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	PAF1	Q8N7H5	531 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CCHCR1	Q8TD31	782 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	SEC14L1	Q92503	715 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	LRRC45	Q96CN5	670 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	SCRN2	Q96FV2	425 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	TOE1	Q96GM8	510 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	SNF8	Q96H20	258 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	RHOXF2	Q9BQY4	288 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	WRAP53	Q9BUR4	548 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	C1QTNF1	Q9BXJ1	281 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CASS4	Q9NQ75	786 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	FBXO4	Q9UKT5	387 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	ZFR2	Q9UPR6	939 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	PLXNB3	Q9ULL4	1909 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	TP53BP1	Q12888	1972 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	FAM47DP	A6NHR8	397 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	ERI2	A8K979	691 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	GALR2	O43603	387 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	BANF1	O75531	89 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	SLU7	O95391	586 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	CLDN7	O95471	211 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	FGF1	P05230	155 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	RPL26	P61254	145 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	GUCY2D	Q02846	1103 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	CNGA3	Q16281	694 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	TEX35	Q5T0J7	233 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	CERCAM	Q5T4B2	595 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	SEL1L3	Q68CR1	1132 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	NAPEPLD	Q6IQ20	393 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	ZDHHC24	Q6UX98	284 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	RFLNA	Q6ZTI6	216 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	DPPA4	Q7L190	304 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	LYSMD3	Q7Z3D4	306 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	LONP2	Q86WA8	852 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	MPP5	Q8N3R9	675 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	DEFB119	Q8N690	84 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	SERPINB12	Q96P63	405 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPP1R2P1	Q96PQ5	205 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	ADGRE3	Q9BY15	652 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	BTBD1	Q9H0C5	482 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	RPL26L1	Q9UNX3	145 aa	Known RBP	13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	SHOC2	Q9UQ13	582 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	NCKAP1	Q9Y2A7	1128 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	COQ6	Q9Y2Z9	468 aa		13.54	□□□□□ -0.24
PTPN7-218	ENST00000496197	CCDC163	A0A0D9SF12	145 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197		A0A1W2PQ67	120 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	GOLGA6C	A6NDK9	693 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	GOLGA6B	A6NDN3	693 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	GOLGA8CP	A6NN73	597 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	PSMD3	O43242	534 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	SLC7A4	O43246	635 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	BUD23	O43709	281 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	AP1G1	O43747	822 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	MMP20	O60882	483 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	ZNF217	O75362	1048 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	C1S	P09871	688 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	GOLGA6D	P0CG33	693 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	XPA	P23025	273 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	CD6	P30203	668 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	POLR2L	P62875	67 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	CRADD	P78560	199 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	FGL2	Q14314	439 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	PTPRCAP	Q14761	206 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	TMEM52B	Q4KMG9	183 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	MSS51	Q4VC12	460 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	FNBP1L	Q5T0N5	605 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	LRRC66	Q68CR7	880 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	DENND2C	Q68D51	928 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	LIPI	Q6XZB0	460 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPP1R21	Q6ZMI0	780 aa		13.53	□□□□□ -0.24
PTPN7-218	ENST00000496197	USP45	Q70EL2	814 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms