RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CXXC4Q9H2H0 198 aa8.93□□□□□ -0.98
GARNL3-219ENST00000495172 LIME1Q9H400 295 aa8.93□□□□□ -0.98
GARNL3-219ENST00000495172 ABCC13Q9NSE7 274 aa8.93□□□□□ -0.98
GARNL3-219ENST00000495172 SIDT1Q9NXL6 827 aaKnown RBP8.93□□□□□ -0.98
GARNL3-219ENST00000495172 VPS51Q9UID3 782 aa8.93□□□□□ -0.98
GARNL3-219ENST00000495172 PLEKHM1Q9Y4G2 1056 aa8.93□□□□□ -0.98
GARNL3-219ENST00000495172 PCDHGA6Q9Y5G7 932 aa8.93□□□□□ -0.98
GARNL3-219ENST00000495172 TGFB1I1O43294 461 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 TSPAN6O43657 245 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 NDUFA10O95299 355 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 FYNP06241 537 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 TIMP2P16035 220 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 UBA7P41226 1012 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 MAPK9P45984 424 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 NOP2P46087 812 aaKnown RBP8.92□□□□□ -0.98
GARNL3-219ENST00000495172 NASPP49321 788 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-219ENST00000495172 DAOAP59103 153 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 CSNK1G2P78368 415 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 NUCB2P80303 420 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 BIRC2Q13490 618 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 AAMPQ13685 434 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 LAMB3Q13751 1172 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 GOLGA7BQ2TAP0 167 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 SLC30A9Q6PML9 568 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 CLEC9AQ6UXN8 241 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 NCCRP1Q6ZVX7 275 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-219ENST00000495172 PELI3Q8N2H9 469 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 DQX1Q8TE96 717 aaKnown RBP8.92□□□□□ -0.98
GARNL3-219ENST00000495172 ASB12Q8WXK4 309 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 AZIN2Q96A70 460 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 SLC39A13Q96H72 371 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 SMAD5Q99717 465 aaKnown RBP8.92□□□□□ -0.98
GARNL3-219ENST00000495172 DDX50Q9BQ39 737 aaKnown RBP8.92□□□□□ -0.98
GARNL3-219ENST00000495172 ZPBPQ9BS86 351 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 LGR4Q9BXB1 951 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 TM6SF2Q9BZW4 377 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 LRRC4Q9HBW1 653 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 TAAR2Q9P1P5 351 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 PDP2Q9P2J9 529 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 USP25Q9UHP3 1055 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 HS3ST2Q9Y278 367 aa8.92□□□□□ -0.98
GARNL3-219ENST00000495172 A0A0D9SEW6 157 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 CCL21O00585 134 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 TM7SF2O76062 418 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 FUCA1P04066 466 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 CCNHP51946 323 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 ADORA2A-AS1P86434 159 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 SLC12A1Q13621 1099 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 FBXL22Q6P050 247 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 ZNF765Q7L2R6 523 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 TAC4Q86UU9 113 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 RASGRP3Q8IV61 690 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 NELFCDQ8IXH7 590 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 ZNF808Q8N4W9 903 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 SLC4A11Q8NBS3 891 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 NETO2Q8NC67 525 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 CHDHQ8NE62 594 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 DNAJB8Q8NHS0 232 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 THAP4Q8WY91 577 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 NCSTNQ92542 709 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 RELTQ969Z4 430 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 TRAPPC9Q96Q05 1148 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 OR6C1Q96RD1 312 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 PRMT1Q99873 361 aaKnown RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 IRX2Q9BZI1 471 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 TM6SF1Q9BZW5 370 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 MUC3BQ9H195 1237 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 LHX9Q9NQ69 397 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 AGPAT4Q9NRZ5 378 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 AGPAT3Q9NRZ7 376 aa8.91□□□□□ -0.98
GARNL3-219ENST00000495172 FCF1Q9Y324 198 aaKnown RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 NCOA6Q14686 2063 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-219ENST00000495172 TRGV8A0A0C4DH27 118 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 RNF212BA8MTL3 300 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 F5H5T6 163 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 AREL1O15033 823 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 KCNAB3O43448 404 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 TMEM63AO94886 807 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 ASS1P00966 412 aaKnown RBP8.9□□□□□ -0.98
GARNL3-219ENST00000495172 HLA-DRAP01903 254 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 UGT2B4P06133 528 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 EDN3P14138 238 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 GAP43P17677 238 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 HTR1BP28222 390 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 PTPN4P29074 926 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 MAN1A1P33908 653 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 GPR3P46089 330 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 SEPHS1P49903 392 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 GFERP55789 205 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 ADAM8P78325 824 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 LRRC14Q15048 493 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 HIF1AQ16665 826 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 SYPL2Q5VXT5 272 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 MEX3BQ6ZN04 569 aaKnown RBP8.9□□□□□ -0.98
GARNL3-219ENST00000495172 BIVMQ86UB2 503 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 SIX6OS1Q8N1H7 587 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 RYBPQ8N488 228 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-219ENST00000495172 WFDC11Q8NEX6 87 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 FBXO18Q8NFZ0 1043 aa8.9□□□□□ -0.98
GARNL3-219ENST00000495172 OR56A4Q8NGH8 313 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms