RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	MIPOL1	Q8TD10	442 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF597	Q96LX8	424 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PPP1R10	Q96QC0	940 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RBM38	Q9H0Z9	239 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GMPR2	Q9P2T1	348 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FAM149A	A5PLN7	773 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CAPN15	O75808	1086 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CTSH	P09668	335 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GJA5	P36382	358 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SERPINH1	P50454	418 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SCNN1G	P51170	649 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HPCA	P84074	193 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	BEX3	Q00994	111 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PFKP	Q01813	784 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TRAP1	Q12931	704 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RAB41	Q5JT25	222 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TLK2	Q86UE8	772 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TOP1MT	Q969P6	601 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	C19orf60	Q96EN9	201 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MRGPRX2	Q96LB1	330 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PPP1R2P1	Q96PQ5	205 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IL12RB2	Q99665	862 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MTF2	Q9Y483	593 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PAPPA2	Q9BXP8	1791 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IL10	P22301	178 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CD86	P42081	329 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CSRP3	P50461	194 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PABPC1L	Q4VXU2	614 aa	Known RBP	13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	KIAA0408	Q6ZU52	694 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	OR2T34	Q8NGX1	318 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	OR2T3	Q8NH03	318 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ANKRD49	Q8WVL7	239 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TRIM15	Q9C019	465 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TIMMDC1	Q9NPL8	285 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RNF181	Q9P0P0	153 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GIMAP2	Q9UG22	337 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071		A0A0J9YYE9	177 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FGF10	O15520	208 aa	Predicted RBP	13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HTRA2	O43464	458 aa	Predicted RBP	13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF23	P17027	643 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CYP2C18	P33260	490 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CASP2	P42575	452 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GALK1	P51570	392 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF33A	Q06730	810 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	INPP5A	Q14642	412 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HMGCLL1	Q8TB92	370 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HDAC10	Q969S8	669 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TUBGCP3	Q96CW5	907 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	KLHL5	Q96PQ7	755 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SPON1	Q9HCB6	807 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TREX1	Q9NSU2	369 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CEPT1	Q9Y6K0	416 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CCL15-CCL14	A0A0B4J2E2	113 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ADAR	P55265	1226 aa	Known RBP	13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ACAP2	Q15057	778 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CCL15	Q16663	113 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	VPS26B	Q4G0F5	336 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CHSY3	Q70JA7	882 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PIM3	Q86V86	326 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SPPL2C	Q8IUH8	684 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SCN4B	Q8IWT1	228 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CBR4	Q8N4T8	237 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CYGB	Q8WWM9	190 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	STON2	Q8WXE9	905 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PAAF1	Q9BRP4	392 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CLK4	Q9HAZ1	481 aa	Known RBP	13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MID1IP1	Q9NPA3	183 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RGS18	Q9NS28	235 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PADI4	Q9UM07	663 aa		13.48	□□□□□ -0.25
SUPT20H-222	ENST00000495071	C17orf102	A2RUQ5	167 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TRIM24	O15164	1050 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CDK4	P11802	303 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GFAP	P14136	432 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GRIK1	P39086	918 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CAPRIN1	Q14444	709 aa	Known RBP	13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RANBP10	Q6VN20	620 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	C3orf58	Q8NDZ4	430 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TCF12	Q99081	682 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC2A11	Q9BYW1	496 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SP110	Q9HB58	689 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	OR51F1	A6NGY5	319 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HHLA1	C9JL84	531 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PDLIM1	O00151	329 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IRAK2	O43187	625 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ODC1	P11926	461 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RPL10	P27635	214 aa	Known RBP	13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ETFB	P38117	255 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CLCN2	P51788	898 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TXNL4A	P83876	142 aa	Known RBP	13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TIGD5	Q53EQ6	642 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GPR141	Q7Z602	305 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IRGQ	Q8WZA9	623 aa		13.47	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLCO4A1	Q96BD0	722 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms