RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 KIAA1024LP59773 190 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 BCL2L1Q07817 233 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 NSUN2Q08J23 767 aaKnown RBP eCLIP23.37■■□□□ 1.33
COL27A1-208ENST00000494780 RFTN1Q14699 578 aaPredicted RBP23.37■■□□□ 1.33
COL27A1-208ENST00000494780 ECHDC3Q96DC8 303 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 GFM1Q96RP9 751 aaKnown RBP23.37■■□□□ 1.33
COL27A1-208ENST00000494780 RBM15Q96T37 977 aaKnown RBP eCLIP23.37■■□□□ 1.33
COL27A1-208ENST00000494780 SNRNP25Q9BV90 132 aaKnown RBP23.37■■□□□ 1.33
COL27A1-208ENST00000494780 CINPQ9BW66 212 aaPredicted RBP23.37■■□□□ 1.33
COL27A1-208ENST00000494780 RABGEF1Q9UJ41 708 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 LRP4O75096 1905 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 KALRNO60229 2985 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 TMCO5BA8MYB1 307 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 CACNB4O00305 520 aaPredicted RBP23.36■■□□□ 1.33
COL27A1-208ENST00000494780 ERCC2P18074 760 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 POLR2LP62875 67 aaKnown RBP23.36■■□□□ 1.33
COL27A1-208ENST00000494780 IL10RBQ08334 325 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 RALGDSQ12967 914 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 EIF3IQ13347 325 aaKnown RBP23.36■■□□□ 1.33
COL27A1-208ENST00000494780 TCEA2Q15560 299 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 NYAP1Q6ZVC0 841 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 ZNF605Q86T29 641 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 ARHGAP12Q8IWW6 846 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 ARFGAP1Q8N6T3 406 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 PLA2G15Q8NCC3 412 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 PEBP4Q96S96 227 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 KCTD15Q96SI1 283 aaPredicted RBP23.36■■□□□ 1.33
COL27A1-208ENST00000494780 SP110Q9HB58 689 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 PCSK1NQ9UHG2 260 aa23.36■■□□□ 1.33
COL27A1-208ENST00000494780 KIF26BQ2KJY2 2108 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 TMEM191CA6NGB0 347 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 D6RAR5 112 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 RNF8O76064 485 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 RECQL5O94762 991 aaPredicted RBP23.35■■□□□ 1.33
COL27A1-208ENST00000494780 HOXC4P09017 264 aaPredicted RBP23.35■■□□□ 1.33
COL27A1-208ENST00000494780 ZNF135P52742 658 aaPredicted RBP23.35■■□□□ 1.33
COL27A1-208ENST00000494780 LIPIQ6XZB0 460 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 DPPA4Q7L190 304 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 PSTKQ8IV42 348 aaKnown RBP23.35■■□□□ 1.33
COL27A1-208ENST00000494780 GPR156Q8NFN8 814 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 OR56A4Q8NGH8 313 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 FNIP1Q8TF40 1166 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 PDXPQ96GD0 296 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 GBP4Q96PP9 640 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 STRADBQ9C0K7 418 aa23.35■■□□□ 1.33
COL27A1-208ENST00000494780 MGAQ8IWI9 3026 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 K7ENP7 123 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 DFFAO00273 331 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 PLD2O14939 933 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 ATMINO43313 823 aaPredicted RBP23.34■■□□□ 1.33
COL27A1-208ENST00000494780 PRPSAP2O60256 369 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 RPLP0P05388 317 aaKnown RBP23.34■■□□□ 1.33
COL27A1-208ENST00000494780 ELFN1P0C7U0 828 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 ATP1A3P13637 1013 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 PLA2G2AP14555 144 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 KELP23276 732 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 HCAR3P49019 387 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 INHBCP55103 352 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 CCL7P80098 99 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 KCTD16Q68DU8 428 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 INO80CQ6PI98 192 aaPredicted RBP23.34■■□□□ 1.33
COL27A1-208ENST00000494780 B3GNT8Q7Z7M8 397 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 FBXO39Q8N4B4 442 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 PAF1Q8N7H5 531 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 OR1E3Q8WZA6 343 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 FUBP1Q96AE4 644 aaKnown RBP23.34■■□□□ 1.33
COL27A1-208ENST00000494780 LRRN3Q9H3W5 708 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 EPB41L5Q9HCM4 733 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 CFAP46Q8IYW2 2715 aa23.34■■□□□ 1.33
COL27A1-208ENST00000494780 A0A1W2PQM1 296 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 TMEM202A6NGA9 273 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 TRAFD1O14545 582 aaPredicted RBP23.33■■□□□ 1.33
COL27A1-208ENST00000494780 TNFRSF10CO14798 259 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 MIPP30301 263 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 TRIM23P36406 574 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 SCNN1BP51168 640 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 RENBPP51606 427 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 AP1S1P61966 158 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 CLN3Q13286 438 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 PPP6R3Q5H9R7 873 aaPredicted RBP23.33■■□□□ 1.33
COL27A1-208ENST00000494780 OGFOD3Q6PK18 319 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 ARHGAP36Q6ZRI8 547 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 CYP4V2Q6ZWL3 525 aaPredicted RBP23.33■■□□□ 1.33
COL27A1-208ENST00000494780 RAB11FIP2Q7L804 512 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 NPWQ8N729 165 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 TTC9Q92623 222 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 TMEM74Q96NL1 305 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 PSKH2Q96QS6 385 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 FGF22Q9HCT0 170 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.33■■□□□ 1.33
COL27A1-208ENST00000494780 SEPT3Q9UH03 358 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 APPL1Q9UKG1 709 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 PCDHGA7Q9Y5G6 932 aa23.33■■□□□ 1.33
COL27A1-208ENST00000494780 ZNF462Q96JM2 2506 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 LRRC53A6NM62 1247 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 TEX33O43247 280 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 GZMAP12544 262 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 PNLIPP16233 465 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 GLB1P16278 677 aa23.32■■□□□ 1.32
COL27A1-208ENST00000494780 CCKBRP32239 447 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms