RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 LAMC2Q13753 1193 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 RBM20Q5T481 1227 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 LIMS2Q7Z4I7 341 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 LRRC52Q8N7C0 313 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 C2CD4AQ8NCU7 369 aaPredicted RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 WNT8BQ93098 351 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 FAM149B1Q96BN6 582 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 FBXL8Q96CD0 374 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 HNRNPABQ99729 332 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 TDRD1Q9BXT4 1180 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 SMARCAD1Q9H4L7 1026 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 SOX17Q9H6I2 414 aaPredicted RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 MRGBPQ9NV56 204 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 TCRBV5S2A0A599 114 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 INSRRP14616 1297 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 ZNF182P17025 639 aaPredicted RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 TTKP33981 857 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 CLEC6AQ6EIG7 209 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 ZC3H7AQ8IWR0 971 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 UPF3AQ9H1J1 476 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 PALMDQ9NP74 551 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 CD320Q9NPF0 282 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 EGFL7Q9UHF1 273 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 AURKCQ9UQB9 309 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 A0A087X1B8 175 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 TRIM43BA6NCK2 446 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 IPO13O94829 963 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 STAMBPO95630 424 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 CAPN3P20807 821 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 HALP42357 657 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 YAP1P46937 504 aaKnown RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 CD300CQ08708 224 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 GALNT1Q10472 559 aaPredicted RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 SPATA22Q8NHS9 363 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 CENPNQ96H22 339 aaPredicted RBP15.43■□□□□ 0.06
SDF4-207ENST00000494748 CSF3RQ99062 836 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 CDHR5Q9HBB8 845 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 GNPTGQ9UJJ9 305 aa15.43■□□□□ 0.06
SDF4-207ENST00000494748 EI24O14681 340 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 MT-CO1P00395 513 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ADARB1P78563 741 aaKnown RBP15.42■□□□□ 0.06
SDF4-207ENST00000494748 ZNF789Q5FWF6 425 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 PAQR9Q6ZVX9 377 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 DDHD1Q8NEL9 900 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 NANOGQ9H9S0 305 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 TREX1Q9NSU2 369 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 RIC8BQ9NVN3 520 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 TMEM9Q9P0T7 183 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ZNF639Q9UID6 485 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 DERAQ9Y315 318 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 VWA7Q9Y334 891 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 SNX10Q9Y5X0 201 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ATP6AP2A0A1C7CYW4 349 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 NCAM2O15394 837 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ATP6AP2O75787 350 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 BAIAP3O94812 1187 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 AXLP30530 894 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 HCAR3P49019 387 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 PCID2Q5JVF3 399 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 NIPAL1Q6NVV3 410 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ABRAXAS1Q6UWZ7 409 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 PHYKPLQ8IUZ5 450 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 GOLM1Q8NBJ4 401 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 HDAC10Q969S8 669 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ELMO2Q96JJ3 720 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 C9orf16Q9BUW7 83 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 FADS3Q9Y5Q0 445 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 WISP3O95389 354 aaPredicted RBP15.42■□□□□ 0.06
SDF4-207ENST00000494748 HSPA8P11142 646 aaKnown RBP15.42■□□□□ 0.06
SDF4-207ENST00000494748 CAPGP40121 348 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 UGP2Q16851 508 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 XAF1Q6GPH4 301 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 NAPEPLDQ6IQ20 393 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ALKAL1Q6UXT8 129 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ZBTB46Q86UZ6 589 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 FAM35AQ86V20 835 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 MINDY1Q8N5J2 469 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 CYGBQ8WWM9 190 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 RPL10LQ96L21 214 aaKnown RBP15.42■□□□□ 0.06
SDF4-207ENST00000494748 TUBA1CQ9BQE3 449 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 SNX25Q9H3E2 840 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 SNTG2Q9NY99 539 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ACTR3BQ9P1U1 418 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 ERGIC3Q9Y282 383 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 TRAF6Q9Y4K3 522 aa15.42■□□□□ 0.06
SDF4-207ENST00000494748 TPST1O60507 370 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 SEC14L2O76054 403 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 SLC6A2P23975 617 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 KCNC1P48547 511 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 HLCSP50747 726 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 PLK1P53350 603 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 RPS3AP61247 264 aaKnown RBP15.41■□□□□ 0.06
SDF4-207ENST00000494748 CSHL1Q14406 222 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 POU6F1Q14863 301 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 PYCR3Q53H96 274 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 INTS6LQ5JSJ4 861 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms