RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CDC25CP30307 473 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 BMPR1AP36894 532 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 CLCN4P51793 760 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 ABCE1P61221 599 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 TUBB3Q13509 450 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 LAMB3Q13751 1172 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 LRRC8EQ6NSJ5 796 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 TTC7BQ86TV6 843 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 APCDD1Q8J025 514 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 FSTL5Q8N475 847 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 GPATCH11Q8N954 259 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 TDRD5Q8NAT2 981 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 MDGA1Q8NFP4 955 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 OR6P1Q8NGX9 317 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 PPP1R14CQ8TAE6 165 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 SHKBP1Q8TBC3 707 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 SPPL3Q8TCT6 385 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 NXNL1Q96CM4 212 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 SLC7A6OSQ96CW6 309 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 LMLNQ96KR4 655 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 TASP1Q9H6P5 420 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 NLE1Q9NVX2 485 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 CPSF2Q9P2I0 782 aaKnown RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 VPS28Q9UK41 221 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 DNAJC16Q9Y2G8 782 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 MTF2Q9Y483 593 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 PCDHGC4Q9Y5F7 938 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 RAI2Q9Y5P3 530 aa10.67□□□□□ -0.7
PRPF4B-209ENST00000494674 A0A087X1B8 175 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 TRAV19A0A0A6YYK7 116 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 H0YHG0 523 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 LEFTY2O00292 366 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 FCHO1O14526 889 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 FZD6O60353 706 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CBX6O95503 412 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 KITP10721 976 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 MYL4P12829 197 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PFKLP17858 780 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 EN2P19622 333 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 TARSP26639 723 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CTNNB1P35222 781 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 GLRBP48167 497 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 AQP5P55064 265 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CDKN2DP55273 166 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PRAMEP78395 509 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CDH18Q13634 790 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CAMK1Q14012 370 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 TYSND1Q2T9J0 566 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 MPP7Q5T2T1 576 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 HECTD2Q5U5R9 776 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PLPP4Q5VZY2 271 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 ZNF549Q6P9A3 640 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PSRC1Q6PGN9 363 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 ALYREFQ86V81 257 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 SPATA6LQ8N4H0 392 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 KIF2BQ8N4N8 673 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 HEXDCQ8WVB3 486 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 HERVK_113Q902F9 699 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 BHMTQ93088 406 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PTCD3Q96EY7 689 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 UBXN10Q96LJ8 280 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 EBF4Q9BQW3 602 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CORO1BQ9BR76 489 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 GATA5Q9BWX5 397 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 EMILIN2Q9BXX0 1053 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 SMG9Q9H0W8 520 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 LRMDAQ9H2I8 198 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 SAR1AQ9NR31 198 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 ASAH2Q9NR71 780 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 TXLNGQ9NUQ3 528 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 PNPOQ9NVS9 261 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 XPR1Q9UBH6 696 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 LSM7Q9UK45 103 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 RUVBL2Q9Y230 463 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 CCL26Q9Y258 94 aa10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 FCF1Q9Y324 198 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 NUP210Q8TEM1 1887 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-209ENST00000494674 TMEM114B3SHH9 223 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 K7ERQ8 282 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 TRAFD1O14545 582 aaPredicted RBP10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 CD3EAPO15446 510 aaKnown RBP10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 DLX3O60479 287 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 TRIM13O60858 407 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 RFPL2O75678 378 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 PRSS56P0CW18 603 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 BMP1P13497 986 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 NQO1P15559 274 aaKnown RBP10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 OGNP20774 298 aaKnown RBP10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 ELF3P78545 371 aaPredicted RBP10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 LMAN2Q12907 356 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 PTPRRQ15256 657 aa10.65□□□□□ -0.7
PRPF4B-209ENST00000494674 TAF1AQ15573 450 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms