RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 A0A0J9YYE9 177 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 H0Y8X5 98 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 CDX4O14627 284 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-208ENST00000494334 VILLO15195 856 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 TRBC1P01850 177 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 FGGP02679 453 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 SYPP08247 313 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 ALPIP09923 528 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 CYP2A6P11509 494 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-208ENST00000494334 C6P13671 934 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 CTPS1P17812 591 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 CA4P22748 312 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 NFKBIAP25963 317 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 AKT2P31751 481 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 HNF1BP35680 557 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 EPHB1P54762 984 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
COL1A1-208ENST00000494334 LMNB2Q03252 620 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 GRIK2Q13002 908 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 SLC14A2Q15849 920 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 KIF19Q2TAC6 998 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 ANKRD20A2Q5SQ80 823 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 ANKRD20A1Q5TYW2 823 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 ANKRD20A3Q5VUR7 823 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 KDELC2Q7Z4H8 507 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 NDUFAF2Q8N183 169 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 MFSD2AQ8NA29 543 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 LPCAT1Q8NF37 534 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 ATG4AQ8WYN0 398 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 CENPTQ96BT3 561 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 BMFQ96LC9 184 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 TRIB3Q96RU7 358 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 EDEM2Q9BV94 578 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 UBP1Q9NZI7 540 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 RPL26L1Q9UNX3 145 aaKnown RBP13.6□□□□□ -0.23
COL1A1-208ENST00000494334 ANKRD6Q9Y2G4 727 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 HS3ST3A1Q9Y663 406 aa13.6□□□□□ -0.23
COL1A1-208ENST00000494334 GVINP1Q7Z2Y8 2422 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 A0A0U1RQS6 177 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 C5orf60A6NFR6 353 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 NPIPB15A6NHN6 443 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 ANKRD66B4E2M5 251 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 F5H423 210 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 TLR4O00206 839 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 LIASO43766 372 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 LZTS3O60299 673 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 ZNF189O75820 626 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 ELFN1P0C7U0 828 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 GM2AP17900 193 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 LHCGRP22888 699 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 MSNP26038 577 aaKnown RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 VIPR1P32241 457 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 GDF10P55107 478 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 CLDN2P57739 230 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 CDK18Q07002 472 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 AGERQ15109 404 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 OASLQ15646 514 aaKnown RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 CNGA3Q16281 694 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 PCSK7Q16549 785 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 QPCTQ16769 361 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 KDELC1Q6UW63 502 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 USP45Q70EL2 814 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 TSPAN33Q86UF1 283 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 IQCHQ86VS3 1027 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 CBARPQ8N350 705 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 RASGEF1CQ8N431 466 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 FAM71DQ8N9W8 422 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 DENND6BQ8NEG7 585 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 OR2I1PQ8NGU4 316 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 CCDC110Q8TBZ0 833 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 SKA1Q96BD8 255 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 OXNAD1Q96HP4 312 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 PBKQ96KB5 322 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 SPATA13Q96N96 652 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 TMEM121Q9BTD3 319 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 GTPBP2Q9BX10 602 aaKnown RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 FRMD8P1Q9BZ68 369 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-208ENST00000494334 ZDHHC5Q9C0B5 715 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 KCND1Q9NSA2 647 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 RSPH14Q9UHP6 348 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 SNX11Q9Y5W9 270 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 RALGAPA1Q6GYQ0 2036 aa13.59□□□□□ -0.23
COL1A1-208ENST00000494334 TRPM6Q9BX84 2022 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 POM121BA6NF01 834 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 PMPCBO75439 489 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 RECQL5O94762 991 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 STK10O94804 968 aaKnown RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 HEXIM1O94992 359 aaKnown RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 STIP1P31948 543 aaKnown RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 CTSKP43235 329 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 ATXN3P54252 364 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-208ENST00000494334 C21orf59P57076 290 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 OVGP1Q12889 678 aa13.58□□□□□ -0.24
COL1A1-208ENST00000494334 GALNT3Q14435 633 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms