RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 DUSP28Q4G0W2 176 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 TOR1AIP1Q5JTV8 583 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 DNTTIP2Q5QJE6 756 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 TTC39AQ5SRH9 613 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC122Q5T0U0 273 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 NAA35Q5VZE5 725 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SULT6B1Q6IMI4 303 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SHQ1Q6PI26 577 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 KLHL24Q6TFL4 600 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 PET117Q6UWS5 81 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 OLFM4Q6UX06 510 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ZDHHC24Q6UX98 284 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CLEC9AQ6UXN8 241 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 GBP6Q6ZN66 633 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 RBM44Q6ZP01 1051 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 RGS9BPQ6ZS82 235 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 C15orf52Q6ZUT6 534 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC186Q7Z3E2 898 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SZRD1Q7Z422 152 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 KCTD20Q7Z5Y7 419 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 PXKQ7Z7A4 578 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CPLX4Q7Z7G2 160 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 METTL23Q86XA0 190 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 P3H2Q8IVL5 708 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 YAF2Q8IY57 180 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 HDDC3Q8N4P3 179 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 TMEM57Q8N5G2 664 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 DPP10Q8N608 796 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 GMCL1P1Q8NEA9 526 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CEP76Q8TAP6 659 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 FAM216AQ8WUB2 273 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 AFG1LQ8WV93 481 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 LPAR1Q92633 364 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 FAM162AQ96A26 154 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 MSI2Q96DH6 328 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 RNF125Q96EQ8 232 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 GIMAP5Q96F15 307 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 COG3Q96JB2 828 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 FAM81BQ96LP2 452 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 AK8Q96MA6 479 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 GBP5Q96PP8 586 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 TWNKQ96RR1 684 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 HTATIP2Q9BUP3 242 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ITPAQ9BY32 194 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CDT1Q9H211 546 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ZMAT3Q9HA38 289 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SMURF2Q9HAU4 748 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 PDE11AQ9HCR9 933 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF304Q9HCX3 659 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SEPSECSQ9HD40 501 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 MID1IP1Q9NPA3 183 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 DDX4Q9NQI0 724 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SNTG1Q9NSN8 517 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SACM1LQ9NTJ5 587 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 TCP11L1Q9NUJ3 509 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 EXOC1Q9NV70 894 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SEPT11Q9NVA2 429 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 PLK2Q9NYY3 685 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ACTR3BQ9P1U1 418 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 STK26Q9P289 416 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CLIP2Q9UDT6 1046 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF215Q9UL58 517 aaPredicted RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 CCL27Q9Y4X3 112 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 N6AMT1Q9Y5N5 214 aa2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SIRT4Q9Y6E7 314 aaPredicted RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 SPAG9O60271 1321 aaKnown RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF335Q9H4Z2 1342 aaPredicted RBP2.31□□□□□ -2.04
PTPN12-212ENST00000494248 TRBV5-3A0A0A0MS03 114 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RPS10-NUDT3A0A1W2PQS6 291 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ARHGAP10A1A4S6 786 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLC22A23A1A5C7 686 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CTAGE9A4FU28 777 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 DPPA5A6NC42 116 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 HMX3A6NHT5 357 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 AQP12BA6NM10 295 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 PTGES3LE9PB15 166 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 H0YAE9 185 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 KIF2AO00139 706 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RAB27BO00194 218 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 PODXLO00592 558 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RRHO14718 337 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 PGRMC2O15173 223 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 VILLO15195 856 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 WDR46O15213 610 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CA12O43570 354 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CEP104O60308 925 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 KINO60870 393 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SMPD2O60906 423 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ATG13O75143 517 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GJB3O75712 270 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLITRK3O94933 977 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TRIM16O95361 564 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 METTL18O95568 372 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 OLFM2O95897 454 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TK1P04183 234 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CLEC3BP05452 202 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ITGA2BP08514 1039 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 BRAFP15056 766 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TMEM11P17152 192 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 NFKBIAP25963 317 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms