RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 CRELD1Q96HD1 420 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 IL12RB2Q99665 862 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 BOCQ9BWV1 1114 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 PACSIN1Q9BY11 444 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 SLC13A1Q9BZW2 595 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 USP29Q9HBJ7 922 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 NOD2Q9HC29 1040 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 PCDHGC4Q9Y5F7 938 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 ITPR1Q14643 2758 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 FREM2Q5SZK8 3169 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 CELSR3Q9NYQ7 3312 aa9.81□□□□□ -0.84
UFD1-210ENST00000494054 A0A087WV48 116 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 EME2A4GXA9 379 aaPredicted RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 TMEM110-MUSTN1A8MSY1 372 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 LMO7DNF2Z398 122 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 MYO1FO00160 1098 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 HTRA2O43464 458 aaPredicted RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 BRINP1O60477 761 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 GP1BAP07359 652 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 TGM2P21980 687 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 ITPKBP27987 946 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 HNRNPH3P31942 346 aaKnown RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 SSR1P43307 286 aaKnown RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 HK3P52790 923 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 TAS2R40P59535 323 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 MAXP61244 160 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 POLR2LP62875 67 aaKnown RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 TRAF2Q12933 501 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 MTM1Q13496 603 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 KRT81Q14533 505 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 ZNF235Q14590 738 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 NFATC4Q14934 902 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 PTPRRQ15256 657 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 ASTE1Q2TB18 679 aaPredicted RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 RD3Q7Z3Z2 195 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 PDZD3Q86UT5 571 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 ATPAF2Q8N5M1 289 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 ZNF564Q8TBZ8 553 aaPredicted RBP9.8□□□□□ -0.84
UFD1-210ENST00000494054 MAPK15Q8TD08 544 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 PDXPQ96GD0 296 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 TBATAQ96M53 351 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 NUDCD1Q96RS6 583 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 B4GALT6Q9UBX8 382 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 ANKRD36A6QL64 1941 aa9.8□□□□□ -0.84
UFD1-210ENST00000494054 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 TMEM202A6NGA9 273 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 CSO75390 466 aaKnown RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 PROSCO94903 275 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 RASGRP1O95267 797 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 MPOP05164 745 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 ANXA6P08133 673 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 ELFN1P0C7U0 828 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 HTR1BP28222 390 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 GJC1P36383 396 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 HSPA9P38646 679 aaKnown RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 EIF2S3P41091 472 aaKnown RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 SRP54P61011 504 aaKnown RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 DPYSL3Q14195 570 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 IHHQ14623 411 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 ACOX1Q15067 660 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 NR0B2Q15466 257 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 CNGA3Q16281 694 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 MARC1Q5VT66 337 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 CBARPQ8N350 705 aaPredicted RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 FSTL5Q8N475 847 aaPredicted RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 PCDH19Q8TAB3 1148 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 PDCD6IPQ8WUM4 868 aaKnown RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 LRRN4Q8WUT4 740 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 OR1E3Q8WZA6 343 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 SPOCK2Q92563 424 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 COQ10AQ96MF6 247 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 WDR92Q96MX6 357 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 DEPDC7Q96QD5 511 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 SMIM14Q96QK8 99 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 MGME1Q9BQP7 344 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 LGR4Q9BXB1 951 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 ABCG4Q9H172 646 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 FGF22Q9HCT0 170 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 MRPL40Q9NQ50 206 aaKnown RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 NCKIPSDQ9NZQ3 722 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 CTTNBP2NLQ9P2B4 639 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 RCOR3Q9P2K3 495 aaPredicted RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 GULP1Q9UBP9 304 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 PADI4Q9UM07 663 aa9.79□□□□□ -0.84
UFD1-210ENST00000494054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.79□□□□□ -0.843e-6■□□□□ 9.2
UFD1-210ENST00000494054 COL27A1Q8IZC6 1860 aaPredicted RBP9.79□□□□□ -0.84
UFD1-210ENST00000494054 A0A0U1RQS6 177 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 MFSD11O43934 449 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 SOCS5O75159 536 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 USP12O75317 370 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 HEXIM1O94992 359 aaKnown RBP9.78□□□□□ -0.84
UFD1-210ENST00000494054 PGLSO95336 258 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 CPP00450 1065 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 H2AFZP0C0S5 128 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms