RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 BEST1O76090 585 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 NPPAP01160 153 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 RHOQP17081 205 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 IMPDH1P20839 514 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PSME3P61289 254 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 USP46P62068 366 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PITX1P78337 314 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 TXNL4AP83876 142 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 LSAMPQ13449 338 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 FASTKQ14296 549 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 NFE2Q16621 373 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 UPP1Q16831 310 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 AASDHQ4L235 1098 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 THEMIS2Q5TEJ8 643 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 MRNIPQ6NTE8 343 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 HFE2Q6ZVN8 426 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 DCP1BQ8IZD4 617 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 TMEM199Q8N511 208 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ATP6V0D2Q8N8Y2 350 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZMIZ2Q8NF64 920 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 MAPK15Q8TD08 544 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 EME1Q96AY2 570 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PPP1R14BQ96C90 147 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PRICKLE1Q96MT3 831 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZNF599Q96NL3 588 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CAB39LQ9H9S4 337 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 SYTL2Q9HCH5 934 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ATP13A1Q9HD20 1204 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 MAN1C1Q9NR34 630 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PNPLA3Q9NST1 481 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZNF358Q9NW07 568 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ETAA1Q9NY74 926 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 GTSE1Q9NYZ3 720 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZDHHC2Q9UIJ5 367 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 TLR6Q9Y2C9 796 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 MTF2Q9Y483 593 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 AP4S1Q9Y587 144 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZNF638Q14966 1978 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 ANKRD33BA6NCL7 494 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 SYCE1LA8MT33 242 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 NEMP1O14524 444 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ACOT8O14734 319 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PHGDHO43175 533 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 HNRNPRO43390 633 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 MATN4O95460 622 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 FGF1P05230 155 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CHRNGP07510 517 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 FGF4P08620 206 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CES1P23141 567 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PMLP29590 882 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 YBEYP58557 167 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 MRPS22P82650 360 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 FPGSQ05932 587 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 DLG1Q12959 904 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 TUSC3Q13454 348 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PARP15Q460N3 678 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PABPC1LQ4VXU2 614 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 LPCAT4Q643R3 524 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 BHLHA9Q7RTU4 235 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CUZD1Q86UP6 607 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 SPATA24Q86W54 205 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 SPATA2LQ8IUW3 424 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ARHGAP12Q8IWW6 846 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 COLGALT2Q8IYK4 626 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CLYBLQ8N0X4 340 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CCNYL1Q8N7R7 359 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 LEMD2Q8NC56 503 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 GPR150Q8NGU9 434 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 LRRN4Q8WUT4 740 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 TMEM40Q8WWA1 233 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 RSPH1Q8WYR4 309 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 BADQ92934 168 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 IMP4Q96G21 291 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 UBXN10Q96LJ8 280 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 ZNF597Q96LX8 424 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CATSPER2Q96P56 530 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 CDK5RAP1Q96SZ6 601 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 NUSAP1Q9BXS6 441 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 GOLGA2P5Q9HBQ8 144 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 INTS10Q9NVR2 710 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 ARMC1Q9NVT9 282 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 RBM22Q9NW64 420 aaKnown RBP eCLIP11.54□□□□□ -0.56
RFC4-214ENST00000494047 TMEM248Q9NWD8 314 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PIH1D1Q9NWS0 290 aaKnown RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 CACNA2D2Q9NY47 1150 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 PLXNA3P51805 1871 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 TCRBV3S1A0A5B6 114 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 MYBPHLA2RUH7 354 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 KLHL33A6NCF5 533 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 TCAF2A6NFQ2 919 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
RFC4-214ENST00000494047 TREHO43280 583 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms