RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ALPIP09923 528 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CHRNB1P11230 501 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CTPS1P17812 591 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 TARSP26639 723 aaKnown RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 PSMD8P48556 350 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 POLR2LP62875 67 aaKnown RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CASP8Q14790 479 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CRYMQ14894 314 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 EOGTQ5NDL2 527 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 KIAA1211LQ6NV74 962 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CAPN12Q6ZSI9 719 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 USP45Q70EL2 814 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 PARS2Q7L3T8 475 aaKnown RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 NLRP9Q7RTR0 991 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 HDXQ7Z353 690 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 TMEM135Q86UB9 458 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 MMAAQ8IVH4 418 aaKnown RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 NDUFAF2Q8N183 169 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 SYNPOQ8N3V7 929 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 OR2T3Q8NH03 318 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 BRSK1Q8TDC3 778 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 ARRDC3Q96B67 414 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 ERLEC1Q96DZ1 483 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 PPP1R16AQ96I34 528 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 MCCC1Q96RQ3 725 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 LYSMD1Q96S90 227 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 SRPK1Q96SB4 655 aaKnown RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 RSPH9Q9H1X1 276 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-231ENST00000494043 TRABDQ9H4I3 376 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 VPS37BQ9H9H4 285 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 MAGEE1Q9HCI5 957 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CD320Q9NPF0 282 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 CHRAC1Q9NRG0 131 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF446Q9NWS9 450 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 MUTYHQ9UIF7 546 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 RPS6KL1Q9Y6S9 549 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 MYLKQ15746 1914 aa11.45□□□□□ -0.58
MCF2L-231ENST00000494043 A0A087WUV0 522 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 KANSL1LA0AUZ9 987 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 CCDC78A2IDD5 438 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 NPIPB15A6NHN6 443 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 LDB2O43679 373 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 PAPSS2O95340 614 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 CRTAMO95727 393 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ADH1BP00325 375 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 NUDT17P0C025 328 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 TIMP2P16035 220 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 COL9A1P20849 921 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 NMBRP28336 390 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 SSTR1P30872 391 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 PHBP35232 272 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 HNF1BP35680 557 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ABL2P42684 1182 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 METAP1P53582 386 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 COPAP53621 1224 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 SATB1Q01826 763 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 SLC29A2Q14542 456 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 UBXN2BQ14CS0 331 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 PTPRRQ15256 657 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 TAF1AQ15573 450 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 UGP2Q16851 508 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 POM121L1PQ3SYA9 428 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ANKRD20A4Q4UJ75 823 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 SPANXN3Q5MJ09 141 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 TSTD2Q5T7W7 516 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 FAM46CQ5VWP2 391 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF776Q68DI1 518 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 Q6ZS52 159 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 C3orf62Q6ZUJ4 267 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 GLT6D1Q7Z4J2 308 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 TTC30BQ8N4P2 665 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.44□□□□□ -0.58
MCF2L-231ENST00000494043 MDGA1Q8NFP4 955 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 GSDMBQ8TAX9 411 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 MFSD3Q96ES6 412 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF778Q96MU6 729 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 FUT8Q9BYC5 575 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 CD248Q9HCU0 757 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 DYRK4Q9NR20 520 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 TREX1Q9NSU2 369 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 RIMKLBQ9ULI2 386 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 MMP17Q9ULZ9 603 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 ARL5AQ9Y689 179 aa11.44□□□□□ -0.58
MCF2L-231ENST00000494043 BPTFQ12830 3046 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 C1orf232A0A0U1RR37 186 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 ZCWPW2A0A1B0GU75 182 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 TCRBV9S1A1TA0A576 114 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 C2orf81A6NN90 581 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 CHURC1-FNTBB4DL54 471 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 AURKAO14965 403 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 ALDH1A2O94788 518 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 ATXN8OSP0DMR3 200 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 CYP2A6P11509 494 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-231ENST00000494043 XPAP23025 273 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-231ENST00000494043 NFKBIAP25963 317 aa11.43□□□□□ -0.58
MCF2L-231ENST00000494043 VIPR1P32241 457 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms