RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 PLK1P53350 603 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 PYCR3Q53H96 274 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 TAS2R42Q7RTR8 314 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CCDC185Q8N715 623 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CALML6Q8TD86 181 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 RNF38Q9H0F5 515 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 TRIT1Q9H3H1 467 aaKnown RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 JPH1Q9HDC5 661 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 SYNPO2Q9UMS6 1093 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ZBBXA8MT70 800 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 NR5A2O00482 541 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 UGT2B11O75310 529 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CILPO75339 1184 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 RGS20O76081 388 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 INMTO95050 263 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 KCNA2P16389 499 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CRHBPP24387 322 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 SERPINB1P30740 379 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 RFC2P35250 354 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ARL2P36404 184 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 E2F2Q14209 437 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 DPYSL2Q16555 572 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CTF1Q16619 201 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CLEC6AQ6EIG7 209 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 LINC00523Q86TU6 105 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CEP97Q8IW35 865 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 TMEM192Q8IY95 271 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 MFSD4AQ8N468 514 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 TTC30BQ8N4P2 665 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 MINDY2Q8NBR6 621 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ALOXE3Q9BYJ1 711 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 MARCH7Q9H992 704 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 GBA2Q9HCG7 927 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CMTM6Q9NX76 183 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 BFARQ9NZS9 450 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 BAG5Q9UL15 447 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CLRN2A0PK11 232 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 NADKO95544 446 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 NR3C2P08235 984 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 MAGP20916 626 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ATP6V0D1P61421 351 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ACAP2Q15057 778 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 GEN1Q17RS7 908 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 DPY19L1Q2PZI1 675 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 IRAK1BP1Q5VVH5 260 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 UBE2UQ5VVX9 321 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 TMEM236Q5W0B7 351 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ZNF280DQ6N043 979 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ZC3HC1Q86WB0 502 aaKnown RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 LGI2Q8N0V4 545 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 SCML4Q8N228 414 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 EIF2B3Q9NR50 452 aaKnown RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 TMPRSS4Q9NRS4 437 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 SLCO3A1Q9UIG8 710 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 CPSF3Q9UKF6 684 aaKnown RBP11.75□□□□□ -0.53
HDAC4-210ENST00000493582 ACOT9Q9Y305 439 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 TNFRSF10AO00220 468 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 OGTO15294 1046 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 PFKMP08237 780 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 HTR1AP08908 422 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 GFAPP14136 432 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 GSTM2P28161 218 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 NMBRP28336 390 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 COPZ1P61923 177 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 SLC12A1Q13621 1099 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 LTBP1Q14766 1721 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
HDAC4-210ENST00000493582 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 PSMA8Q8TAA3 256 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 NDNFQ8TB73 568 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 SLC22A17Q8WUG5 538 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 GPR22Q99680 433 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 PIF1Q9H611 641 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 SPON1Q9HCB6 807 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 GIMAP2Q9UG22 337 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 ILVBLA1L0T0 632 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
HDAC4-210ENST00000493582 NUAK1O60285 661 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 MSCO60682 206 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 PGK1P00558 417 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 AHSGP02765 367 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 ITGB3P05106 788 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 C7P10643 843 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 KCNA5P22460 613 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 BAATQ14032 418 aaPredicted RBP11.74□□□□□ -0.53
HDAC4-210ENST00000493582 CATSPER4Q7RTX7 472 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 TFAP2DQ7Z6R9 452 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 ELMOD1Q8N336 334 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 CLEC4CQ8WTT0 213 aa11.74□□□□□ -0.53
HDAC4-210ENST00000493582 GPR78Q96P69 363 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms