RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 MTIF3Q9H2K0 278 aaKnown RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 CUEDC2Q9H467 287 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 LIN7BQ9HAP6 207 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 PCDHB16Q9NRJ7 776 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 INIPQ9NRY2 104 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 FAM53CQ9NYF3 392 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 HACD3Q9P035 362 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 ATXN10Q9UBB4 475 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 PACSIN2Q9UNF0 486 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 CDC14AQ9UNH5 594 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 FNDC3AQ9Y2H6 1198 aaKnown RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 TDRKHQ9Y2W6 561 aaKnown RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 SAMHD1Q9Y3Z3 626 aaKnown RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 HBS1LQ9Y450 684 aaKnown RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 NFE2L3Q9Y4A8 694 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 MAB21L2Q9Y586 359 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 PCDHA3Q9Y5H8 950 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 CORINQ9Y5Q5 1042 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 COPG1Q9Y678 874 aaKnown RBP4.25□□□□□ -1.73
BRCA1-220ENST00000492859 MAD1L1Q9Y6D9 718 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 PFASO15067 1338 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 PRR36Q9H6K5 1346 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 KDM3AQ9Y4C1 1321 aa4.25□□□□□ -1.73
BRCA1-220ENST00000492859 FAM230AA0A1W2PPH8 454 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 VWA3AA6NCI4 1184 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 OR6C70A6NIJ9 312 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GABRR3A8MPY1 467 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 C12orf71A8MTZ7 269 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 FADS2P1A8MWK0 482 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 A8MX80 341 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ISM1B1AKI9 464 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 C22orf46C9J442 243 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 KBTBD13C9JR72 458 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 H3BUI4 141 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ARVCFO00192 962 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 LGALS8O00214 317 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PRRG1O14668 218 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 MAP2K7O14733 419 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SLC16A6O15403 523 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 KCNN4O15554 427 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 STX10O60499 249 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RPS6KA4O75676 772 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GPX5O75715 221 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CCNB2O95067 398 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SNAPINO95295 136 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 APOA1P02647 267 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 MPOP05164 745 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ABHD2P08910 425 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GSTT2P0CG29 244 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GSTT2BP0CG30 244 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF888P0CJ79 500 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NPR1P16066 1061 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 FUT1P19526 365 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 HOXA9P31269 272 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PGM1P36871 562 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 FASLGP48023 281 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NRIP1P48552 1158 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CDK8P49336 464 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CCT3P49368 545 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PCYT1AP49585 367 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RGS7P49802 495 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 AIF1P55008 147 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SUMO3P55854 103 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CORO7P57737 925 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 KLC1Q07866 573 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 TGM3Q08188 693 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 TDGQ13569 410 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SNTB1Q13884 538 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 BOP1Q14137 746 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CAPRIN1Q14444 709 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SGCBQ16585 318 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NTRK2Q16620 822 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 DECR1Q16698 335 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 TXNRD1Q16881 649 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 HKDC1Q2TB90 917 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CRY2Q49AN0 593 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 FASTKD1Q53R41 847 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 XKR4Q5GH76 650 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GNASQ5JWF2 1037 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ARMC12Q5T9G4 340 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 WLSQ5T9L3 541 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 C6orf163Q5TEZ5 329 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 IL23RQ5VWK5 629 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 DAB2IPQ5VWQ8 1189 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 TDRD10Q5VZ19 366 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SLFN13Q68D06 897 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 KRT40Q6A162 431 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 STYK1Q6J9G0 422 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PAOXQ6QHF9 649 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 DCXRQ7Z4W1 244 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SPATA19Q7Z5L4 167 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 WDR5BQ86VZ2 330 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 LONP2Q86WA8 852 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PALB2Q86YC2 1186 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ADGRF2Q8IZF7 708 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZDHHC14Q8IZN3 488 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CLEC4FQ8N1N0 589 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGAP18Q8N392 663 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NATD1Q8N6N6 113 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms