RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MID2Q9UJV3 735 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 VPS4AQ9UN37 437 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 AP4E1Q9UPM8 1137 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 NOSIPQ9Y314 301 aaKnown RBP9.75□□□□□ -0.85
VPS8-225ENST00000492449 AGAP5A6NIR3 686 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.75□□□□□ -0.85
VPS8-225ENST00000492449 WDR64B1ANS9 1081 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 XYLBO75191 536 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 SRP72O76094 671 aaKnown RBP9.75□□□□□ -0.85
VPS8-225ENST00000492449 MYL3P08590 195 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 FOSL1P15407 271 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 TFEBP19484 476 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 CCNCP24863 283 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 CD68P34810 354 aaPredicted RBP9.75□□□□□ -0.85
VPS8-225ENST00000492449 GJA9P57773 515 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 ACTR2P61160 394 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 GK5Q6ZS86 529 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 SV2AQ7L0J3 742 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 USP37Q86T82 979 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 LDHDQ86WU2 507 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 HMGCLL1Q8TB92 370 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 RDH11Q8TC12 318 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 SPATA18Q8TC71 538 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 ROPN1LQ96C74 230 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 P2RX7Q99572 595 aaKnown RBP9.75□□□□□ -0.85
VPS8-225ENST00000492449 GATA5Q9BWX5 397 aaPredicted RBP9.75□□□□□ -0.85
VPS8-225ENST00000492449 ALOXE3Q9BYJ1 711 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 TRIM39Q9HCM9 518 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 FBXL12Q9NXK8 326 aa9.75□□□□□ -0.85
VPS8-225ENST00000492449 TK2O00142 265 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 AXIN1O15169 862 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 FOSP01100 380 aaPredicted RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 HSD17B1P14061 328 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 RPL17P18621 184 aaKnown RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 CYP2A7P20853 494 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 CACNB3P54284 484 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 SQLEQ14534 574 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 GLRA4Q5JXX5 417 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 DNAJC24Q6P3W2 148 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 NOXA1Q86UR1 476 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 CBWD2Q8IUF1 395 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 SH3KBP1Q96B97 665 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 OMA1Q96E52 524 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 TOE1Q96GM8 510 aaKnown RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 RDH12Q96NR8 316 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 ACAD9Q9H845 621 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 RSAD1Q9HA92 442 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 PLSCR3Q9NRY6 295 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 NDFIP2Q9NV92 336 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 TOR4AQ9NXH8 423 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 ACTR3BQ9P1U1 418 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 EIF3KQ9UBQ5 218 aaKnown RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 AP3M1Q9Y2T2 418 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 CCDC78A2IDD5 438 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 CAPN5O15484 640 aaPredicted RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 TRIM16O95361 564 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 LSM8O95777 96 aaKnown RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 IL1R2P27930 398 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 GNA15P30679 374 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 POLD2P49005 469 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 NRLP54845 237 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 PRKCDQ05655 676 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 PLA2G4EQ3MJ16 856 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 STRADAQ7RTN6 431 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 PIGZQ86VD9 579 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 CELF2-AS1Q8N7Q2 184 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 ANKRD53Q8N9V6 530 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 TM9SF2Q99805 663 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 KIFC1Q9BW19 673 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 MUC13Q9H3R2 512 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 TIGARQ9NQ88 270 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.74□□□□□ -0.85
VPS8-225ENST00000492449 SLC9A2Q9UBY0 812 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 PDE10AQ9Y233 779 aa9.74□□□□□ -0.85
VPS8-225ENST00000492449 FAM149AA5PLN7 773 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 HMX3A6NHT5 357 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 WTIPA6NIX2 430 aaPredicted RBP9.73□□□□□ -0.85
VPS8-225ENST00000492449 LEUTXA8MZ59 168 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 USP17L10C9JJH3 530 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 TBX1O43435 398 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 PSMD10O75832 226 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 SEMA3DO95025 777 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 APOA4P06727 396 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 DNAJB1P25685 340 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 TALDO1P37837 337 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 CBX5P45973 191 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 RPS6P62753 249 aaKnown RBP9.73□□□□□ -0.85
VPS8-225ENST00000492449 GSTO1P78417 241 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 MFSD10Q14728 455 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 HADHQ16836 314 aaKnown RBP9.73□□□□□ -0.85
VPS8-225ENST00000492449 PXDC1Q5TGL8 231 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 ARHGEF16Q5VV41 709 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 SHEQ5VZ18 495 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 TMEM236Q5W0B7 351 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 XKRXQ6PP77 449 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 ZNF767PQ75MW2 155 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 ZBTB33Q86T24 672 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 RFX6Q8HWS3 928 aa9.73□□□□□ -0.85
VPS8-225ENST00000492449 ZNF566Q969W8 418 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms