RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 PCDH19Q8TAB3 1148 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 WDR92Q96MX6 357 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 UBL7Q96S82 380 aaPredicted RBP18.49■□□□□ 0.55
SMIM4-205ENST00000491607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMIM4-205ENST00000491607 SEPT3Q9UH03 358 aa18.49■□□□□ 0.55
SMIM4-205ENST00000491607 TCEA3O75764 348 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 RECQL5O94762 991 aaPredicted RBP18.48■□□□□ 0.55
SMIM4-205ENST00000491607 IL1R2P27930 398 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 PCK1P35558 622 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 RENBPP51606 427 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 AP1S1P61966 158 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 CXADRP78310 365 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 TLE3Q04726 772 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 SLC10A7Q0GE19 358 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 RALGDSQ12967 914 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 ZNF235Q14590 738 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 TMCO4Q5TGY1 634 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 FOXR1Q6PIV2 292 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 GKN2Q86XP6 184 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 KYQ8NBH2 561 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 PSKH2Q96QS6 385 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 ISCUQ9H1K1 167 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 THSD1Q9NS62 852 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMIM4-205ENST00000491607 ENTPD2Q9Y5L3 495 aa18.48■□□□□ 0.55
SMIM4-205ENST00000491607 TTC24A2A3L6 582 aaPredicted RBP18.47■□□□□ 0.55
SMIM4-205ENST00000491607 CFAP69A5D8W1 941 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 CACNB4O00305 520 aaPredicted RBP18.47■□□□□ 0.55
SMIM4-205ENST00000491607 CASC3O15234 703 aaKnown RBP18.47■□□□□ 0.55
SMIM4-205ENST00000491607 DXOO77932 396 aaKnown RBP18.47■□□□□ 0.55
SMIM4-205ENST00000491607 TNFP01375 233 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 TCF4P15884 667 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 AMPD1P23109 780 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 RBMS1P29558 406 aaKnown RBP18.47■□□□□ 0.55
SMIM4-205ENST00000491607 ERVPABLB-1P60509 514 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 TPM4P67936 248 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 SPIDRQ14159 915 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 IQCB1Q15051 598 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 ACOX1Q15067 660 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 DPYSL2Q16555 572 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 LVRNQ6Q4G3 990 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 LIPIQ6XZB0 460 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 DPPA4Q7L190 304 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 WDR48Q8TAF3 677 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 PDCD6IPQ8WUM4 868 aaKnown RBP18.47■□□□□ 0.55
SMIM4-205ENST00000491607 GRAMD1AQ96CP6 724 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 PDXPQ96GD0 296 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 HIC2Q96JB3 615 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 ZNF599Q96NL3 588 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 GPR34Q9UPC5 381 aa18.47■□□□□ 0.55
SMIM4-205ENST00000491607 SMG1Q96Q15 3661 aaKnown RBP18.46■□□□□ 0.55
SMIM4-205ENST00000491607 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.46■□□□□ 0.55
SMIM4-205ENST00000491607 TRAFD1O14545 582 aaPredicted RBP18.46■□□□□ 0.55
SMIM4-205ENST00000491607 BOLA3Q53S33 107 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 FIGNQ5HY92 759 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 BROXQ5VW32 411 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 KCTD16Q68DU8 428 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 GPR155Q7Z3F1 870 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 POLNQ7Z5Q5 900 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 SDR16C5Q8N3Y7 309 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 OR56A4Q8NGH8 313 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 KCNE4Q8WWG9 221 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 FUBP1Q96AE4 644 aaKnown RBP18.46■□□□□ 0.55
SMIM4-205ENST00000491607 CCDC74AQ96AQ1 378 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 NSMCE3Q96MG7 304 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 CSPG4P5Q96PW8 444 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 ASCL3Q9NQ33 180 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 ETNK2Q9NVF9 386 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 KNTC1P50748 2209 aa18.46■□□□□ 0.55
SMIM4-205ENST00000491607 TMEM202A6NGA9 273 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 RARAP10276 462 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 KELP23276 732 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 KIAA1024LP59773 190 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 PIGHQ14442 188 aaPredicted RBP18.45■□□□□ 0.54
SMIM4-205ENST00000491607 HGSNATQ68CP4 663 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 DENND2CQ68D51 928 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 BBS5Q8N3I7 341 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 ATPAF2Q8N5M1 289 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 NSMCE1Q8WV22 266 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 BTBD6Q96KE9 485 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 RBM15Q96T37 977 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMIM4-205ENST00000491607 THAP2Q9H0W7 228 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 MRPL40Q9NQ50 206 aaKnown RBP18.45■□□□□ 0.54
SMIM4-205ENST00000491607 B4GALT6Q9UBX8 382 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 MOSPD1Q9UJG1 213 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 PCDHGC4Q9Y5F7 938 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 BZW2Q9Y6E2 419 aaKnown RBP18.45■□□□□ 0.54
SMIM4-205ENST00000491607 IGSF10Q6WRI0 2623 aa18.45■□□□□ 0.54
SMIM4-205ENST00000491607 A0A1W2PNU3 283 aaPredicted RBP18.44■□□□□ 0.54
SMIM4-205ENST00000491607 SYCE3A1L190 88 aa18.44■□□□□ 0.54
SMIM4-205ENST00000491607 KLK10O43240 276 aa18.44■□□□□ 0.54
SMIM4-205ENST00000491607 CPP00450 1065 aa18.44■□□□□ 0.54
SMIM4-205ENST00000491607 HSPA9P38646 679 aaKnown RBP18.44■□□□□ 0.54
SMIM4-205ENST00000491607 SSR1P43307 286 aaKnown RBP18.44■□□□□ 0.54
SMIM4-205ENST00000491607 FANCCQ00597 558 aa18.44■□□□□ 0.54
SMIM4-205ENST00000491607 NFKBIBQ15653 356 aa18.44■□□□□ 0.54
SMIM4-205ENST00000491607 TXNRD3NBQ6F5E7 133 aa18.44■□□□□ 0.54
SMIM4-205ENST00000491607 TAF8Q7Z7C8 310 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms