RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 POLR2LP62875 67 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CCDC38Q502W7 563 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CASC4Q6P4E1 433 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 FBXO38Q6PIJ6 1188 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 TMEM92Q6UXU6 159 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 PARS2Q7L3T8 475 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CACUL1Q86Y37 369 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 FBXO36Q8NEA4 188 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 BLOC1S5Q8TDH9 187 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 HNRNPLLQ8WVV9 542 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 PPP1R16AQ96I34 528 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 C16orf96A6NNT2 1141 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CHURC1-FNTBB4DL54 471 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 GPR37L1O60883 481 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 ALPIP09923 528 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CTPS1P17812 591 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 MTAPQ13126 283 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CST6Q15828 149 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CRY1Q16526 586 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 UGP2Q16851 508 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 FAM46CQ5VWP2 391 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 ZNF776Q68DI1 518 aaPredicted RBP21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 PYROXD1Q8WU10 500 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 ARRDC3Q96B67 414 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 C9orf72Q96LT7 481 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 EBNA1BP2Q99848 306 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 CDC42EP4Q9H3Q1 356 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 C2orf42Q9NWW7 574 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 SAMD15Q9P1V8 674 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 PPIL1Q9Y3C6 166 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 SPO11Q9Y5K1 396 aa21.84■■□□□ 1.09
VCPKMT-204ENST00000491402 PTPRRQ15256 657 aa21.83■■□□□ 1.09
VCPKMT-204ENST00000491402 LRRC73Q5JTD7 316 aa21.83■■□□□ 1.09
VCPKMT-204ENST00000491402 USP45Q70EL2 814 aa21.83■■□□□ 1.09
VCPKMT-204ENST00000491402 STAMBPL1Q96FJ0 436 aa21.83■■□□□ 1.09
VCPKMT-204ENST00000491402 SCRN2Q96FV2 425 aa21.83■■□□□ 1.09
VCPKMT-204ENST00000491402 BPTFQ12830 3046 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 CAPN8A6NHC0 703 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 UPK3BL1B0FP48 263 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 UPK3BL2E5RIL1 263 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 ADH1BP00325 375 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 PMS2P54278 862 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 PCID2Q5JVF3 399 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 TMEM31Q5JXX7 168 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 BEND6Q5SZJ8 279 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 SYT13Q7L8C5 426 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 TMPRSS6Q8IU80 811 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 NDUFAF2Q8N183 169 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 BRSK1Q8TDC3 778 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 MCCC1Q96RQ3 725 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 RANBP9Q96S59 729 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 TRIM56Q9BRZ2 755 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 SEMA4AQ9H3S1 761 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 MAGEE1Q9HCI5 957 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 DYRK4Q9NR20 520 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 CHRAC1Q9NRG0 131 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 ZC3H7BQ9UGR2 993 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 TCAF1Q9Y4C2 921 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 MID1O15344 667 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 ATG13O75143 517 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 TIMP2P16035 220 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 ADRA1DP25100 572 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 AVPR2P30518 371 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 HNF1BP35680 557 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 ABL2P42684 1182 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 RPS14P62263 151 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 SEPT6Q14141 434 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 GLT6D1Q7Z4J2 308 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 TTC7BQ86TV6 843 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 SPEM1Q8N4L4 309 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 PPHLN1Q8NEY8 458 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 MDGA1Q8NFP4 955 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 PTCD2Q8WV60 388 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 LYSMD1Q96S90 227 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 NAT9Q9BTE0 207 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 KIFC1Q9BW19 673 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 C1QTNF1Q9BXJ1 281 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 SLC6A17Q9H1V8 727 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 HACD3Q9P035 362 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 SOX13Q9UN79 622 aa21.82■■□□□ 1.08
VCPKMT-204ENST00000491402 MAGEB16A2A368 324 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 HEATR9A2RTY3 570 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 NPIPB15A6NHN6 443 aaPredicted RBP21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 PRR33A8MZF0 331 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 AURKAO14965 403 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 C5AR1P21730 350 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 CCNJLQ8IV13 435 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 AADATQ8N5Z0 425 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 LRRC4CQ9HCJ2 640 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 ARFGAP3Q9NP61 516 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 NINJ2Q9NZG7 142 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 ARL5AQ9Y689 179 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 CACNA1IQ9P0X4 2223 aa21.81■■□□□ 1.08
VCPKMT-204ENST00000491402 TCRBV21S2A2A0A5A6 115 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 PLK4O00444 970 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 LDB2O43679 373 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 C7P10643 843 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 ADRB3P13945 408 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms