RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CDH1P12830 882 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 GOT1P17174 413 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 MYF6P23409 242 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 ALDH3B2P48448 385 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 CDH13P55290 713 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 NR6A1Q15406 480 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 ANKS6Q68DC2 871 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 NEPROQ6NW34 567 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 ZDHHC17Q8IUH5 632 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 RMDN1Q96DB5 314 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 MFSD3Q96ES6 412 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 C8orf37Q96NL8 207 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 NPLQ9BXD5 320 aaPredicted RBP11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 DIABLOQ9NR28 239 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 B3GNT3Q9Y2A9 372 aa11.34□□□□□ -0.59
CRNKL1-204ENST00000490910 NFASCO94856 1347 aa11.33□□□□□ -0.59
CRNKL1-204ENST00000490910 NPHS1O60500 1241 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 PRKD3O94806 890 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF37AP17032 561 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 PROZP22891 400 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 DAG1Q14118 895 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 TJAP1Q5JTD0 557 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 COLEC12Q5KU26 742 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CLIP4Q8N3C7 705 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 NETO2Q8NC67 525 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 TBC1D15Q8TC07 691 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 C19orf60Q96EN9 201 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 FIZ1Q96SL8 496 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 HGH1Q9BTY7 390 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 EIF3LQ9Y262 564 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CPQQ9Y646 472 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 NCF1BA6NI72 391 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 NCF1CA8MVU1 366 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 RGS10O43665 173 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 RECQL5O94762 991 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 IPO13O94829 963 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 FTH1P02794 183 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 NCF1P14598 390 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 HPCAL1P37235 193 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 OPRL1P41146 370 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 ENPEPQ07075 957 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CERCAMQ5T4B2 595 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 KLHL17Q6TDP4 642 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 ANKFN1Q8N957 763 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 LPAR1Q92633 364 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 QKIQ96PU8 341 aaKnown RBP eCLIP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 AGAP2Q99490 1192 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 RBM4BQ9BQ04 359 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 RBM4Q9BWF3 364 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 C20orf27Q9GZN8 174 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 ACAD9Q9H845 621 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CENPBD1B2RD01 187 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 NDUFS3O75489 264 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 MTHFD1P11586 935 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CPB1P15086 417 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 TNFSF9P41273 254 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 HNRNPFP52597 415 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 BCAT1P54687 386 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 PLEKHG7Q6ZR37 379 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 GALNT12Q8IXK2 581 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 TAGAPQ8N103 731 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 CPSF7Q8N684 471 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 FBXL18Q96ME1 805 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 SP110Q9HB58 689 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 DDIT4Q9NX09 232 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 MAP3K20Q9NYL2 800 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 GMIPQ9P107 970 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 TMEM98Q9Y2Y6 226 aa11.33□□□□□ -0.6
CRNKL1-204ENST00000490910 FAM172BPA6NC97 362 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 AZIN1O14977 448 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 ZW10O43264 779 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 VNN1O95497 513 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PCID2Q5JVF3 399 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 TRIQKQ629K1 86 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 LILRA2Q8N149 483 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 DHRS1Q96LJ7 313 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 SOX17Q9H6I2 414 aaPredicted RBP11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 TBC1D30Q9Y2I9 924 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 PSAT1Q9Y617 370 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 C7orf72A4D263 438 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 TMEM233B4DJY2 109 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 BCKDKO14874 412 aa11.32□□□□□ -0.6
CRNKL1-204ENST00000490910 ARPC2O15144 300 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms