RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 PANX2Q96RD6 677 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 MGME1Q9BQP7 344 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 WRAP53Q9BUR4 548 aaKnown RBP13.68□□□□□ -0.22
SFXN4-208ENST00000490417 CNTNAP3Q9BZ76 1288 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 SLC13A1Q9BZW2 595 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 BRD8Q9H0E9 1235 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 USP29Q9HBJ7 922 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 ETNK2Q9NVF9 386 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 DNPEPQ9ULA0 475 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 PHTF1Q9UMS5 762 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 ITM2BQ9Y287 266 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 CA5BQ9Y2D0 317 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
SFXN4-208ENST00000490417 PDE2AO00408 941 aaPredicted RBP13.67□□□□□ -0.22
SFXN4-208ENST00000490417 HYAL3O43820 417 aaPredicted RBP13.67□□□□□ -0.22
SFXN4-208ENST00000490417 BUB1BO60566 1050 aaPredicted RBP13.67□□□□□ -0.22
SFXN4-208ENST00000490417 CSF2P04141 144 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 CKMT2P17540 419 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 KELP23276 732 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 DGKAP23743 735 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 LIG3P49916 1009 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 ZNF75DP51815 510 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 DAB2P98082 770 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 GALNT2Q10471 571 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 BNIP3Q12983 259 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
SFXN4-208ENST00000490417 AGERQ15109 404 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 USP45Q70EL2 814 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 CHCHD4Q8N4Q1 142 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 TC2NQ8N9U0 490 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 PCDH19Q8TAB3 1148 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
SFXN4-208ENST00000490417 FAF2Q96CS3 445 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 ECHDC3Q96DC8 303 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 BMFQ96LC9 184 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 RNF157Q96PX1 679 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 NLGN3Q9NZ94 848 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 SPASTQ9UBP0 616 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 GGT7Q9UJ14 662 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 BTBD3Q9Y2F9 522 aa13.67□□□□□ -0.22
SFXN4-208ENST00000490417 FAM221BA6H8Z2 402 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 POM121BA6NF01 834 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 TRAFD1O14545 582 aaPredicted RBP13.66□□□□□ -0.22
SFXN4-208ENST00000490417 APOL1O14791 398 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
SFXN4-208ENST00000490417 RFPL3O75679 317 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 PIAS2O75928 621 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 CD48P09326 243 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 ATXN1LP0C7T5 689 aaKnown RBP13.66□□□□□ -0.22
SFXN4-208ENST00000490417 C6P13671 934 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 NME1P15531 152 aaKnown RBP13.66□□□□□ -0.22
SFXN4-208ENST00000490417 MMP12P39900 470 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 ARSEP51690 589 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 EPHB1P54762 984 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 PFN3P60673 137 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 E2F1Q01094 437 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 TFDP2Q14188 446 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 FGL2Q14314 439 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 PDK1Q15118 436 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 SHBQ15464 509 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 ATP13A4Q4VNC1 1196 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 CCDC157Q569K6 752 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 NCBP2-AS2Q69YL0 99 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 DPPA4Q7L190 304 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 TMPRSS12Q86WS5 348 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 SDR16C5Q8N3Y7 309 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 TEX26Q8N6G2 289 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 TBATAQ96M53 351 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 KLF6Q99612 283 aaPredicted RBP13.66□□□□□ -0.22
SFXN4-208ENST00000490417 NT5MQ9NPB1 228 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 RBM22Q9NW64 420 aaKnown RBP eCLIP13.66□□□□□ -0.22
SFXN4-208ENST00000490417 PCDHA13Q9Y5I0 950 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 CSNK1G3Q9Y6M4 447 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 CHD8Q9HCK8 2581 aa13.66□□□□□ -0.22
SFXN4-208ENST00000490417 A0A0A6YYK5 440 aaPredicted RBP13.65□□□□□ -0.22
SFXN4-208ENST00000490417 PSMD11O00231 422 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 CACNB4O00305 520 aaPredicted RBP13.65□□□□□ -0.22
SFXN4-208ENST00000490417 SCAMP1O15126 338 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 RAD51BO15315 384 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 HTRA2O43464 458 aaPredicted RBP13.65□□□□□ -0.22
SFXN4-208ENST00000490417 PSTPIP1O43586 416 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 MFSD11O43934 449 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 SDC3O75056 442 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 LCA5LO95447 670 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 CPP00450 1065 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 KRT1P04264 644 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 CCNYL3P0C7X3 344 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 CCNB1P14635 433 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 RGRP47804 291 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 NR2C2P49116 596 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 RPIAP49247 311 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 HADHBP55084 474 aaKnown RBP13.65□□□□□ -0.22
SFXN4-208ENST00000490417 NAP1L1P55209 391 aaKnown RBP13.65□□□□□ -0.22
SFXN4-208ENST00000490417 TAS2R40P59535 323 aa13.65□□□□□ -0.22
SFXN4-208ENST00000490417 PPARDQ03181 441 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms