RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 KIAA1024LP59773 190 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 MAXP61244 160 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 AP1S1P61966 158 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 ELP6Q0PNE2 266 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 SLC10A2Q12908 348 aaPredicted RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 RFTN1Q14699 578 aaPredicted RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 NFATC4Q14934 902 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 PAFAH1B3Q15102 231 aaKnown RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 ESRP1Q6NXG1 681 aaKnown RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 ALKBH5Q6P6C2 394 aaKnown RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 RFLNAQ6ZTI6 216 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 KYQ8NBH2 561 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 ZNF564Q8TBZ8 553 aaPredicted RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 HSPH1Q92598 858 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 NXPE2Q96DL1 559 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 HIC2Q96JB3 615 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 LGR4Q9BXB1 951 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 NRSN2Q9GZP1 204 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 ZWILCHQ9H900 591 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 NOD2Q9HC29 1040 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 OR1A2Q9Y585 309 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 PCYT1BQ9Y5K3 369 aaPredicted RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 AHCTF1Q8WYP5 2266 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 CFAP69A5D8W1 941 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 H3BRJ5 948 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 TPP1O14773 563 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 SOCS5O75159 536 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PALMO75781 387 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 RECQL5O94762 991 aaPredicted RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PROSCO94903 275 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 MAP3K6O95382 1288 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PRLP01236 227 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PDHA1P08559 390 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 CDK4P11802 303 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 HK3P52790 923 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 GBE1Q04446 702 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 TBX2Q13207 712 aaPredicted RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 MTM1Q13496 603 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 C1orf61Q13536 156 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PIGHQ14442 188 aaPredicted RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 INPP5AQ14642 412 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 GRM3Q14832 879 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 SLC18A3Q16572 532 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 CDKN3Q16667 212 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 C19orf48Q6RUI8 117 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PCSK4Q6UW60 755 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 TSPAN33Q86UF1 283 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 ZNF354CQ86Y25 554 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 LZTR1Q8N653 840 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PLD5Q8N7P1 536 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 ARRDC2Q8TBH0 407 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 IFI44Q8TCB0 444 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 CXorf40AQ8TE69 158 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 LRRN4Q8WUT4 740 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PIH1D2Q8WWB5 315 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 RBM15Q96T37 977 aaKnown RBP eCLIP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 CHP1Q99653 195 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 CINPQ9BW66 212 aaPredicted RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 ATP13A3Q9H7F0 1226 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 SP110Q9HB58 689 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 MRPL47Q9HD33 250 aaKnown RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 RCOR3Q9P2K3 495 aaPredicted RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 SALL4Q9UJQ4 1053 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 CLCA2Q9UQC9 943 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PPIL1Q9Y3C6 166 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 PCDHGC4Q9Y5F7 938 aa11.87□□□□□ -0.51
SRSF4-204ENST00000489898 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
SRSF4-204ENST00000489898 TOR1BO14657 336 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 YY2O15391 372 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 NOBOXO60393 691 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 MFAP3LO75121 409 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 MTA2O94776 668 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 HEXIM1O94992 359 aaKnown RBP11.86□□□□□ -0.51
SRSF4-204ENST00000489898 MT-CO3P00414 261 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 MMP2P08253 660 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 ITPKBP27987 946 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 SERPINA4P29622 427 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 EIF2S3P41091 472 aaKnown RBP11.86□□□□□ -0.51
SRSF4-204ENST00000489898 PEX5P50542 639 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 LRRC14Q15048 493 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 BOLA3Q53S33 107 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 PRRT3Q5FWE3 981 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 TMCO3Q6UWJ1 677 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 HSD11B1LQ7Z5J1 315 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 PDZD3Q86UT5 571 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 C17orf82Q86X59 251 aaPredicted RBP11.86□□□□□ -0.51
SRSF4-204ENST00000489898 NRROSQ86YC3 692 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 CCL4L1Q8NHW4 92 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 LMX1AQ8TE12 382 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 CPLX3Q8WVH0 158 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 FATE1Q969F0 183 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 TSACCQ96A04 125 aaPredicted RBP11.86□□□□□ -0.51
SRSF4-204ENST00000489898 DTD2Q96FN9 168 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms