RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 ARL4AP40617 200 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 LIG3P49916 1009 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 PAPOLAP51003 745 aaKnown RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 ADKP55263 362 aaKnown RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 TMPRSS3P57727 454 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 SRP54P61011 504 aaKnown RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 TYRO3Q06418 890 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 COL9A2Q14055 689 aaPredicted RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 DPYSL2Q16555 572 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 WSCD2Q2TBF2 565 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 RAB6CQ53S08 254 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 EFL1Q7Z2Z2 1120 aaKnown RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 CLEC14AQ86T13 490 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 PYROXD2Q8N2H3 581 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 NIPA2Q8N8Q9 360 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 NSMCE1Q8WV22 266 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 LGMNQ99538 433 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 MYOCQ99972 504 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 DPYSL5Q9BPU6 564 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 SLC39A8Q9C0K1 460 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 STRADBQ9C0K7 418 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 RAB6CQ9H0N0 254 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 DHX35Q9H5Z1 703 aaKnown RBP9.6□□□□□ -0.87
CCT3-213ENST00000489870 PCDH12Q9NPG4 1184 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 ASCL3Q9NQ33 180 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 DNPEPQ9ULA0 475 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 PHTF1Q9UMS5 762 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 LRRK1Q38SD2 2015 aa9.6□□□□□ -0.87
CCT3-213ENST00000489870 FLNBO75369 2602 aaKnown RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 H3BRJ5 948 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 TRAFD1O14545 582 aaPredicted RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 NUDT21O43809 227 aaKnown RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 BUB1BO60566 1050 aaPredicted RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 GCATO75600 419 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 ITGA2BP08514 1039 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 C6P13671 934 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 GLB1P16278 677 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 TGM2P21980 687 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 MIPP30301 263 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 GKP32189 559 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 CCKBRP32239 447 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 ZNF165P49910 485 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 CDH6P55285 790 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 TPM4P67936 248 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 GABREP78334 506 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 DPTQ07507 201 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 KLHL30Q0D2K2 578 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SQSTM1Q13501 440 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SPIDRQ14159 915 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 INPP5AQ14642 412 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 NR1I3Q14994 352 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 ASIC2Q16515 512 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 ZNF542PQ5EBM4 170 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 LIPIQ6XZB0 460 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 DPPA4Q7L190 304 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 PHLDB2Q86SQ0 1253 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 MARCH9Q86YJ5 346 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SPNS2Q8IVW8 549 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SLC35F3Q8IY50 421 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 GPR156Q8NFN8 814 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 OR6K2Q8NGY2 324 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SCRN2Q96FV2 425 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 LRRC61Q9BV99 259 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 MAGEB5Q9BZ81 275 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 CLPBQ9H078 707 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SP110Q9HB58 689 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 MBNL1Q9NR56 388 aaKnown RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 TRNAU1APQ9NX07 287 aaKnown RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 IP6K2Q9UHH9 426 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 ENTPD2Q9Y5L3 495 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 ACTL7AQ9Y615 435 aa9.59□□□□□ -0.87
CCT3-213ENST00000489870 SMG1Q96Q15 3661 aaKnown RBP9.59□□□□□ -0.87
CCT3-213ENST00000489870 LRRC53A6NM62 1247 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 J3KR12 359 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 NVLO15381 856 aaKnown RBP9.58□□□□□ -0.88
CCT3-213ENST00000489870 LRCH4O75427 683 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 NEBLO76041 1014 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 RECQL5O94762 991 aaPredicted RBP9.58□□□□□ -0.88
CCT3-213ENST00000489870 GJB6O95452 261 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 ELFN1P0C7U0 828 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 CYP2A6P11509 494 aaPredicted RBP9.58□□□□□ -0.88
CCT3-213ENST00000489870 CR2P20023 1033 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 CD82P27701 267 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 ITPKBP27987 946 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 GPR3P46089 330 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 INHBCP55103 352 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 RPL26P61254 145 aaKnown RBP9.58□□□□□ -0.88
CCT3-213ENST00000489870 OGDHQ02218 1023 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 DPYSQ14117 519 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
CCT3-213ENST00000489870 IRF4Q15306 451 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 CDKN3Q16667 212 aa9.58□□□□□ -0.88
CCT3-213ENST00000489870 DEFB133Q30KQ1 61 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms