RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CSF3RQ99062 836 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 MAGEE1Q9HCI5 957 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 MKKSQ9NPJ1 570 aaPredicted RBP5.29□□□□□ -1.56
CCDC39-206ENST00000489868 MPP6Q9NZW5 540 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 CDC14AQ9UNH5 594 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 FAM96BQ9Y3D0 163 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 SCINQ9Y6U3 715 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 CCDC189A1A4V9 331 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 ACOT8O14734 319 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 TSPAN4O14817 238 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 CREB3O43889 395 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 NDUFS7O75251 213 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 CYC1P08574 325 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 IGHV4-30-4P0DP06 118 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 CHATP28329 748 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 EPHA8P29322 1005 aaPredicted RBP5.28□□□□□ -1.56
CCDC39-206ENST00000489868 HNRNPH1P31943 449 aaKnown RBP5.28□□□□□ -1.56
CCDC39-206ENST00000489868 EIF2S3P41091 472 aaKnown RBP5.28□□□□□ -1.56
CCDC39-206ENST00000489868 PAFAH1B1P43034 410 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 ITGADQ13349 1161 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 HIST2H2ACQ16777 129 aaPredicted RBP5.28□□□□□ -1.56
CCDC39-206ENST00000489868 IZUMO4Q1ZYL8 232 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 ALG11Q2TAA5 492 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 LCTLQ6UWM7 567 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 QSOX2Q6ZRP7 698 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 RRM2BQ7LG56 351 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 DCP1BQ8IZD4 617 aaKnown RBP5.28□□□□□ -1.56
CCDC39-206ENST00000489868 SMRP1Q8NCR6 262 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 RND1Q92730 232 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 RTP4Q96DX8 246 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 NR1H4Q96RI1 486 aaPredicted RBP5.28□□□□□ -1.56
CCDC39-206ENST00000489868 HAUS8Q9BT25 410 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 WDR26Q9H7D7 661 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 PCDHB16Q9NRJ7 776 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 A4GNTQ9UNA3 340 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 CAMK2AQ9UQM7 478 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 PAM16Q9Y3D7 125 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 PCDHGB1Q9Y5G3 927 aa5.28□□□□□ -1.56
CCDC39-206ENST00000489868 KDM3AQ9Y4C1 1321 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 BTBD18B2RXH4 712 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 TGFB1I1O43294 461 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 MMP2P08253 660 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 ABCD1P33897 745 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 SF3B4Q15427 424 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC39-206ENST00000489868 TCTN1Q2MV58 587 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 CPLX2Q6PUV4 134 aaKnown RBP5.27□□□□□ -1.57
CCDC39-206ENST00000489868 ZCCHC9Q8N567 271 aaKnown RBP5.27□□□□□ -1.57
CCDC39-206ENST00000489868 ZBTB2Q8N680 514 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 CADM4Q8NFZ8 388 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 NFKBIDQ8NI38 313 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 OTULINQ96BN8 352 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 DDX31Q9H8H2 851 aaKnown RBP5.27□□□□□ -1.57
CCDC39-206ENST00000489868 SLCO3A1Q9UIG8 710 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 TINAGQ9UJW2 476 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 STON1Q9Y6Q2 735 aa5.27□□□□□ -1.57
CCDC39-206ENST00000489868 A0A1B0GUV1 79 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 SMTNL1A8MU46 457 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 NPHP1O15259 732 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 KDM4BO94953 1096 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 TGFB3P10600 412 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 G6PDP11413 515 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 ICAM3P32942 547 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 HARS2P49590 506 aaKnown RBP5.26□□□□□ -1.57
CCDC39-206ENST00000489868 EEF1A2Q05639 463 aaKnown RBP5.26□□□□□ -1.57
CCDC39-206ENST00000489868 DLG1Q12959 904 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 COASYQ13057 564 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 EIF2S3LQ2VIR3 472 aaKnown RBP5.26□□□□□ -1.57
CCDC39-206ENST00000489868 C18orf65Q6ZTR6 163 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 SLC46A3Q7Z3Q1 461 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 AGBL3Q8NEM8 1001 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 BEST2Q8NFU1 509 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 SPATA22Q8NHS9 363 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 HUS1BQ8NHY5 278 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 CREB3L4Q8TEY5 395 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 NOC3LQ8WTT2 800 aaKnown RBP5.26□□□□□ -1.57
CCDC39-206ENST00000489868 LMLNQ96KR4 655 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 C1QTNF4Q9BXJ3 329 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 BRF2Q9HAW0 419 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 BPIFA1Q9NP55 256 aa5.26□□□□□ -1.57
CCDC39-206ENST00000489868 SOCS6O14544 535 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 SEC14L5O43304 696 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 CLDN14O95500 239 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 GPTP24298 496 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 COL28A1Q2UY09 1125 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 AMZ1Q400G9 498 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 INO80CQ6PI98 192 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-206ENST00000489868 LINGO2Q7L985 606 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 TSPYL6Q8N831 410 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 SCCPDHQ8NBX0 429 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 ADGRG7Q96K78 797 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 ZNF570Q96NI8 536 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 H2AFJQ9BTM1 129 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 WWOXQ9NZC7 414 aa5.25□□□□□ -1.57
CCDC39-206ENST00000489868 FBXO9Q9UK97 447 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-206ENST00000489868 INTS6Q9UL03 887 aaKnown RBP5.25□□□□□ -1.57
CCDC39-206ENST00000489868 SNX9Q9Y5X1 595 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms