RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CES3Q6UWW8 571 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 GDPD4Q6W3E5 623 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 LRRC6Q86X45 466 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 SFTPA1Q8IWL2 248 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 CHST14Q8NCH0 376 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 CDKL2Q92772 493 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 LYSMD1Q96S90 227 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 PAFAH2Q99487 392 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 TRABDQ9H4I3 376 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 ZDHHC6Q9H6R6 413 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 MAGEE1Q9HCI5 957 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 SLC2A4RGQ9NR83 387 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS26A-205ENST00000489656 PSMC3IPQ9P2W1 217 aaPredicted RBP14.23□□□□□ -0.13
VPS26A-205ENST00000489656 DKK3Q9UBP4 350 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 ZNF180Q9UJW8 692 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 HCN2Q9UL51 889 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 PHTF1Q9UMS5 762 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 SPO11Q9Y5K1 396 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 PRUNE2Q8WUY3 3088 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 BPTFQ12830 3046 aa14.23□□□□□ -0.13
VPS26A-205ENST00000489656 HMGB1P1B2RPK0 211 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 LOC730098B7Z3J9 87 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 POC1B-GALNT4F8VUJ3 575 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 H3BQF6 201 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 SIN3BO75182 1162 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 GKP32189 559 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 MSH2P43246 934 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 SOX9P48436 509 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 ARCN1P48444 511 aaKnown RBP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 EPHB1P54762 984 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 PDE1BQ01064 536 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 PFKPQ01813 784 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 SEPT6Q14141 434 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 EFTUD2Q15029 972 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 TTMPQ5BVD1 217 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 ESRP1Q6NXG1 681 aaKnown RBP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 BRAT1Q6PJG6 821 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 BLOC1S5Q8TDH9 187 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 STYXQ8WUJ0 223 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 DCAKDQ8WVC6 231 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 ARL8AQ96BM9 186 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 TLCD1Q96CP7 247 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 MCCC1Q96RQ3 725 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 STMN4Q9H169 189 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-205ENST00000489656 SMYD2Q9NRG4 433 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 IL36AQ9UHA7 158 aa14.22□□□□□ -0.13
VPS26A-205ENST00000489656 TLDC2A0PJX2 215 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 CAPN8A6NHC0 703 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 CXorf49A8MYA2 514 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 K7EQS6 105 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 RGS16O15492 202 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 PRNPP04156 253 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 UGT2B4P06133 528 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 DRD1P21728 446 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 ARNTP27540 789 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 IL12RB1P42701 662 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 ZNF140P52738 457 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 POLR2LP62875 67 aaKnown RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 ELAVL3Q14576 367 aaKnown RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 CNGA3Q16281 694 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 SKIDA1Q1XH10 827 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 TMEM196Q5HYL7 178 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 C9orf64Q5T6V5 341 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 EGFLAMQ63HQ2 1017 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 SERPINA13PQ6UXR4 307 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 GLT6D1Q7Z4J2 308 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 KCNMB4Q86W47 210 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 SLC26A11Q86WA9 606 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 ZSWIM9Q86XI8 627 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 CNTN4Q8IWV2 1026 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 UNC5BQ8IZJ1 945 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 NDUFAF2Q8N183 169 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 TTC30BQ8N4P2 665 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 TMIEQ8NEW7 156 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 MDGA1Q8NFP4 955 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 OR13J1Q8NGT2 312 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 OR8D1Q8WZ84 308 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 FBRSL1Q9HCM7 1045 aaKnown RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 NLE1Q9NVX2 485 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-205ENST00000489656 NSMCE4AQ9NXX6 385 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 PIAS3Q9Y6X2 628 aa14.21□□□□□ -0.13
VPS26A-205ENST00000489656 PIKFYVEQ9Y2I7 2098 aa14.21□□□□□ -0.14
VPS26A-205ENST00000489656 C2orf81A6NN90 581 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 SLC7A4O43246 635 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 BNIP3LO60238 219 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 RNF40O75150 1001 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 LEFTY1O75610 366 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 PRKCGP05129 697 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 ASGR2P07307 311 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 CTSLP07711 333 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 INHBAP08476 426 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 SRFP11831 508 aa14.2□□□□□ -0.14
VPS26A-205ENST00000489656 LPOP22079 712 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms