RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 MFSD7Q6UXD7 560 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 ANKS3Q6ZW76 656 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 DSG4Q86SJ6 1040 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GALNT6Q8NCL4 622 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 LSM14AQ8ND56 463 aaKnown RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 ZNF398Q8TD17 642 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TCP10LQ8TDR4 215 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 NDRG1Q92597 394 aaKnown RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 NTAN1Q96AB6 310 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 LRGUKQ96M69 825 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 CLSTN3Q9BQT9 956 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TTPALQ9BTX7 342 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 DCLK3Q9C098 648 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 POPDC2Q9HBU9 364 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GIMAP4Q9NUV9 329 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TAGLN3Q9UI15 199 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 C5orf67F2Z3F1 127 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PIK3R2O00459 728 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 KPNA4O00629 521 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 CASQ2O14958 399 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 SNPHO15079 494 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 ADAM12O43184 909 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GJB5O95377 273 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PROCP04070 461 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 KRT7P08729 469 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 OR4Q2P0C623 313 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 LCP1P13796 627 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 LAG3P18627 525 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 AIF1P55008 147 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 ESRRGP62508 458 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PITX1P78337 314 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 NME3Q13232 169 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PPP6R3Q5H9R7 873 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 FAM171A1Q5VUB5 890 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 SYPL2Q5VXT5 272 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 RWDD4Q6NW29 188 aaKnown RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 DCUN1D2Q6PH85 259 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 DCP1BQ8IZD4 617 aaKnown RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 PSD4Q8NDX1 1056 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 ZBP1Q9H171 429 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.88□□□□□ -0.83
NOD1-208ENST00000489614 FNIP2Q9P278 1114 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 KLQ9UEF7 1012 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GNPTGQ9UJJ9 305 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PRG3Q9Y2Y8 225 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 KIAA1549LQ6ZVL6 1849 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 LOC100653049A0A140TA62 436 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 WDR27A2RRH5 827 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 H7C4K7 107 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 KRT34O76011 436 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 PDGFRAP16234 1089 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 PSMC3P17980 439 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 ATF6P18850 670 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 BGNP21810 368 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 IVDP26440 423 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 L1CAMP32004 1257 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 HADHAP40939 763 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 YWHAZP63104 245 aaKnown RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 SLC39A12Q504Y0 691 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 TFDP3Q5H9I0 405 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 BBS12Q6ZW61 710 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 TMCO2Q7Z6W1 182 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 IGFN1Q86VF2 1251 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 ABI1Q8IZP0 508 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 TTC9BQ8N6N2 239 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 PQLC3Q8N755 202 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 ATP6V0D2Q8N8Y2 350 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 SLC35B2Q8TB61 432 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 DPF3Q92784 378 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 BADQ92934 168 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 CITED4Q96RK1 184 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 UNKQ9C0B0 810 aaKnown RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 TRIT1Q9H3H1 467 aaKnown RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 ZNF395Q9H8N7 513 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 VPS37BQ9H9H4 285 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 COPS7BQ9H9Q2 264 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 OSER1Q9NX31 292 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 SMG5Q9UPR3 1016 aaKnown RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 ACTL7BQ9Y614 415 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 TRANK1O15050 2925 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 C1RP00736 705 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 IGLV3-27P01718 113 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 EIF2S1P05198 315 aaKnown RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 RALAP11233 206 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 CYP2F1P24903 491 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 HOXC13P31276 330 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 PBX3P40426 434 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 THOP1P52888 689 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 IRX4P78413 519 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 FPGSQ05932 587 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 STAT4Q14765 748 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 NFE2Q16621 373 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 SEL1L2Q5TEA6 688 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 DEFB106AQ8N104 65 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 B3GALT6Q96L58 329 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 PSKH2Q96QS6 385 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms