RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 TRIM4Q9C037 500 aa10.46□□□□□ -0.73
CHKB-211ENST00000489453 KLC2Q9H0B6 622 aa10.46□□□□□ -0.73
CHKB-211ENST00000489453 CLSTN2Q9H4D0 955 aa10.46□□□□□ -0.73
CHKB-211ENST00000489453 ATP13A3Q9H7F0 1226 aa10.46□□□□□ -0.73
CHKB-211ENST00000489453 NLRC4Q9NPP4 1024 aa10.46□□□□□ -0.73
CHKB-211ENST00000489453 FAM207AQ9NSI2 230 aaPredicted RBP10.46□□□□□ -0.73
CHKB-211ENST00000489453 SAMSN1Q9NSI8 373 aaKnown RBP10.46□□□□□ -0.73
CHKB-211ENST00000489453 TSPAN11A1L157 253 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 ARHGAP42A6NI28 874 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CCP110O43303 1012 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 ITGB2P05107 769 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 PRKCGP05129 697 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 PNLIPP16233 465 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CHRNB2P17787 502 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 MMP12P39900 470 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CSRP3P50461 194 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 AIF1P55008 147 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CYTH1Q15438 398 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 TGIF1Q15583 401 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 TSR1Q2NL82 804 aaKnown RBP10.45□□□□□ -0.74
CHKB-211ENST00000489453 C14orf28Q4W4Y0 310 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CERCAMQ5T4B2 595 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 SPECC1LQ69YQ0 1117 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 DCUN1D2Q6PH85 259 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 WDR59Q6PJI9 974 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 SPRED1Q7Z699 444 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 VASH2Q86V25 355 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 C3orf20Q8ND61 904 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 GPR156Q8NFN8 814 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 KIAA1524Q8TCG1 905 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 OR1E3Q8WZA6 343 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 TUBGCP5Q96RT8 1024 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CINPQ9BW66 212 aaPredicted RBP10.45□□□□□ -0.74
CHKB-211ENST00000489453 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 VPS16Q9H269 839 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 GANQ9H2C0 597 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 DPEP2Q9H4A9 486 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 NOL6Q9H6R4 1146 aaKnown RBP10.45□□□□□ -0.74
CHKB-211ENST00000489453 SUDS3Q9H7L9 328 aaPredicted RBP10.45□□□□□ -0.74
CHKB-211ENST00000489453 SP110Q9HB58 689 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 CYP4F12Q9HCS2 524 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 LRIT1Q9P2V4 623 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 APPL1Q9UKG1 709 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 ACSL6Q9UKU0 697 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 DGKBQ9Y6T7 804 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 SPTA1P02549 2419 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 SDK2Q58EX2 2172 aa10.45□□□□□ -0.74
CHKB-211ENST00000489453 PRAMEF33A0A0G2JMD5 474 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 RHPN2P1A8MT19 583 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 WASH4PA8MWX3 477 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 PDE2AO00408 941 aaPredicted RBP10.44□□□□□ -0.74
CHKB-211ENST00000489453 DAPK3O43293 454 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 PRAMEF10O60809 474 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 PALMO75781 387 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 ITIH1P19827 911 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 CD82P27701 267 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 HTR7P34969 479 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 KLK7P49862 253 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 ZNF143P52747 638 aaPredicted RBP10.44□□□□□ -0.74
CHKB-211ENST00000489453 NDST2P52849 883 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 GSCP56915 257 aaPredicted RBP10.44□□□□□ -0.74
CHKB-211ENST00000489453 POLR2LP62875 67 aaKnown RBP10.44□□□□□ -0.74
CHKB-211ENST00000489453 BCL2L1Q07817 233 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 ACOX1Q15067 660 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 AGERQ15109 404 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 CLEC16AQ2KHT3 1053 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 ATG14Q6ZNE5 492 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 SRLQ86TD4 932 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 ZFAND4Q86XD8 727 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 PHF13Q86YI8 300 aaPredicted RBP10.44□□□□□ -0.74
CHKB-211ENST00000489453 CAMK1DQ8IU85 385 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 UMODL1-AS1Q8N2C9 162 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 EXD3Q8N9H8 876 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 PLA2G15Q8NCC3 412 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 ANKRD20A12PQ8NF67 263 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 USP7Q93009 1102 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 VOPP1Q96AW1 172 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 CELF6Q96J87 481 aaKnown RBP10.44□□□□□ -0.74
CHKB-211ENST00000489453 MCEEQ96PE7 176 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 NUP62CLQ9H1M0 184 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 WDR26Q9H7D7 661 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 FZD10Q9ULW2 581 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 RNF215Q9Y6U7 377 aa10.44□□□□□ -0.74
CHKB-211ENST00000489453 A0A1W2PQC6 194 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 CFAP69A5D8W1 941 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 TMEM202A6NGA9 273 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 SIGLEC16A6NMB1 481 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 J3KR12 359 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 EEF2KO00418 725 aaKnown RBP10.43□□□□□ -0.74
CHKB-211ENST00000489453 TEX33O43247 280 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 NUDT21O43809 227 aaKnown RBP10.43□□□□□ -0.74
CHKB-211ENST00000489453 NOBOXO60393 691 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 PRAMEF11O60813 436 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 PPFIA2O75334 1257 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 RECQL5O94762 991 aaPredicted RBP10.43□□□□□ -0.74
CHKB-211ENST00000489453 FAM87AP0C7U9 286 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 UNGP13051 313 aaPredicted RBP10.43□□□□□ -0.74
CHKB-211ENST00000489453 PPM1FP49593 454 aaPredicted RBP10.43□□□□□ -0.74
CHKB-211ENST00000489453 ATP1A2P50993 1020 aa10.43□□□□□ -0.74
CHKB-211ENST00000489453 PAPOLAP51003 745 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms