RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 WFIKKN2Q8TEU8 576 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 RND1Q92730 232 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 USP13Q92995 863 aaPredicted RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 HVCN1Q96D96 273 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 BICD1Q96G01 975 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 MKKSQ9NPJ1 570 aaPredicted RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 TINAGQ9UJW2 476 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 TBX20Q9UMR3 447 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 LSM4Q9Y4Z0 139 aaKnown RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 SNX9Q9Y5X1 595 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 ARID4BQ4LE39 1312 aaPredicted RBP3.71□□□□□ -1.81
RFC4-213ENST00000489028 SAA2-SAA4A0A096LPE2 208 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 TEX13CA0A0J9YWL9 993 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 DENND3A2RUS2 1198 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 SOCS6O14544 535 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 TPD52L2O43399 206 aaKnown RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 ZNF432O94892 652 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 MT-CYBP00156 380 aaPredicted RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 MMP2P08253 660 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 PPM1FP49593 454 aaPredicted RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 VAMP2P63027 116 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 RPP30P78346 268 aaKnown RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 ITGADQ13349 1161 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 OASLQ15646 514 aaKnown RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 CALCRLQ16602 461 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 C2orf68Q2NKX9 166 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 EIF2S3LQ2VIR3 472 aaKnown RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 TMEM95Q3KNT9 176 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 ZNF672Q499Z4 452 aaPredicted RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 PPP6R3Q5H9R7 873 aaPredicted RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 WBP2NLQ6ICG8 309 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 LCTLQ6UWM7 567 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 NEK10Q6ZWH5 1172 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 ZNF354CQ86Y25 554 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 CPXCR1Q8N123 301 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 ZNF441Q8N8Z8 693 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 SORCS1Q8WY21 1168 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 DNASE2BQ8WZ79 361 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 OTULINQ96BN8 352 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 FBXL8Q96CD0 374 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 PABPC5Q96DU9 382 aaKnown RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 APOPT1Q96IL0 206 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 KLHL15Q96M94 604 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 IL17FQ96PD4 163 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 DUX5Q96PT3 197 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 POLR3GLQ9BT43 218 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 PLEKHA4Q9H4M7 779 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 MAGEE1Q9HCI5 957 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 C1RLQ9NZP8 487 aa3.71□□□□□ -1.82
RFC4-213ENST00000489028 LRRFIP2Q9Y608 721 aaKnown RBP3.71□□□□□ -1.82
RFC4-213ENST00000489028 A0A1W2PQM1 296 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 MAGEA13PA6NCF6 341 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 PRAC2D3DTV9 90 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 ZNF587BE7ETH6 402 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 TAF4O00268 1085 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 MID1O15344 667 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 PLRG1O43660 514 aaKnown RBP3.7□□□□□ -1.82
RFC4-213ENST00000489028 LDB3O75112 727 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GAGE7O76087 117 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 TFP02787 698 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GAGE12FP0CL80 117 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GAGE12GP0CL81 117 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GAGE12IP0CL82 117 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 G6PDP11413 515 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 COX7A2P14406 83 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GPTP24298 496 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 PEX5P50542 639 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 ZNF155Q12901 538 aaPredicted RBP3.7□□□□□ -1.82
RFC4-213ENST00000489028 GAGE1Q13065 139 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GAGE4Q13068 117 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 CAMK1Q14012 370 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 PPP2R5BQ15173 497 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GPR68Q15743 365 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 WDR73Q6P4I2 378 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 QSOX2Q6ZRP7 698 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 SATL1Q86VE3 508 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 RFLNBQ8N5W9 214 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 AGBL3Q8NEM8 1001 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 ZCCHC10Q8TBK6 192 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 MORC4Q8TE76 937 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 MTBPQ96DY7 904 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 C3orf30Q96M34 536 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 OR1F2PQ96R84 312 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 MMTAG2Q9BU76 263 aaKnown RBP3.7□□□□□ -1.82
RFC4-213ENST00000489028 CHMP4AQ9BY43 222 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 LRRC4Q9HBW1 653 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 DONSONQ9NYP3 566 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 SMARCAL1Q9NZC9 954 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 ZNF224Q9NZL3 707 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 GJD2Q9UKL4 321 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 ICAM5Q9UMF0 924 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 FAM96BQ9Y3D0 163 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 PSAT1Q9Y617 370 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 STON1Q9Y6Q2 735 aa3.7□□□□□ -1.82
RFC4-213ENST00000489028 CLGNO14967 610 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 BUB3O43684 328 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 MTA2O94776 668 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 SEC31AO94979 1220 aaKnown RBP3.69□□□□□ -1.82
RFC4-213ENST00000489028 ABCD3P28288 659 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZBTB17Q13105 803 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms