RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZBTB17Q13105 803 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 EIF2B5Q13144 721 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 LRRC14Q15048 493 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PDK1Q15118 436 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PTPRRQ15256 657 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 IRF4Q15306 451 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 LLGL1Q15334 1064 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 ZNF542PQ5EBM4 170 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 RAB44Q7Z6P3 723 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 RCOR2Q8IZ40 523 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 EID2Q8N6I1 236 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PNPLA1Q8N8W4 532 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 LRRC57Q8N9N7 239 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PDCD6IPQ8WUM4 868 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 CALR3Q96L12 384 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 MCCC1Q96RQ3 725 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 UCKL1Q9NWZ5 548 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 SAE1Q9UBE0 346 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 ANGPTL2Q9UKU9 493 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PNMA8BQ9ULN7 279 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PHTF1Q9UMS5 762 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 RAI2Q9Y5P3 530 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 hCG_1818297A0A087WSY0 165 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 TRIM38O00635 465 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 TOR1BO14657 336 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 LZTS3O60299 673 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 CST8O60676 142 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 PIAS2O75928 621 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 IPO7O95373 1038 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 CPP00450 1065 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 CSF2P04141 144 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 MMP2P08253 660 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 SPINK2P20155 84 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 NR2C2P49116 596 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 YPEL5P62699 121 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 DYNLT1P63172 113 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 ITKQ08881 620 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 PDE1CQ14123 709 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 INAVAQ3KP66 663 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 TFDP3Q5H9I0 405 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 ARMC12Q5T9G4 340 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 B4GALNT4Q76KP1 1039 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 CHCHD4Q8N4Q1 142 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 ADAMTS14Q8WXS8 1223 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 SCRN2Q96FV2 425 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 COQ10AQ96MF6 247 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 SMIM14Q96QK8 99 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 PCDHA3Q9Y5H8 950 aa16.01■□□□□ 0.15
CTDSP1-209ENST00000488627 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 NPIPB15A6NHN6 443 aaPredicted RBP16■□□□□ 0.15
CTDSP1-209ENST00000488627 HYAL3O43820 417 aaPredicted RBP16■□□□□ 0.15
CTDSP1-209ENST00000488627 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
CTDSP1-209ENST00000488627 TRIM16O95361 564 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 LHCGRP22888 699 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 VIPR1P32241 457 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 CTNNA1P35221 906 aaKnown RBP16■□□□□ 0.15
CTDSP1-209ENST00000488627 PEX5P50542 639 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 TFDP2Q14188 446 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 INPP5AQ14642 412 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 CNGA3Q16281 694 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 ODF2Q5BJF6 829 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 KAZNQ674X7 775 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 PARGQ86W56 976 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16■□□□□ 0.15
CTDSP1-209ENST00000488627 PLA2G15Q8NCC3 412 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 DESI2Q9BSY9 194 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 SCNM1Q9BWG6 230 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 BRD8Q9H0E9 1235 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 DNAJC28Q9NX36 388 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 TRIM10Q9UDY6 481 aa16■□□□□ 0.15
CTDSP1-209ENST00000488627 FAM221BA6H8Z2 402 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 ELFN1P0C7U0 828 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TGM2P21980 687 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 HNRNPKP61978 463 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■□□□□ 8.8
CTDSP1-209ENST00000488627 SKOR1P84550 965 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 AP1B1Q10567 949 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 ZNF211Q13398 564 aaPredicted RBP15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 PRKD1Q15139 912 aaPredicted RBP15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 PPP2R5EQ16537 467 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 PROX2Q3B8N5 592 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TSPAN33Q86UF1 283 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 PELI3Q8N2H9 469 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 PAF1Q8N7H5 531 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 KIAA1524Q8TCG1 905 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TADA1Q96BN2 335 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 HERPUD2Q9BSE4 406 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 APOOQ9BUR5 198 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TDRD1Q9BXT4 1180 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 FTSJ1Q9UET6 329 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 APOBEC2Q9Y235 224 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 CHKBQ9Y259 395 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TPRP12270 2363 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-209ENST00000488627 TMEM131Q92545 1883 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms