RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 HCAR2Q8TDS4 363 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 SPOCK2Q92563 424 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 ARRDC3Q96B67 414 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 NAT9Q9BTE0 207 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 OSBPL1AQ9BXW6 950 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 MRM3Q9HC36 420 aaKnown RBP15.2■□□□□ 0.02
CTNS-206ENST00000488623 DKK3Q9UBP4 350 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 NDRG2Q9UN36 371 aaKnown RBP15.2■□□□□ 0.02
CTNS-206ENST00000488623 PLAAQ9Y263 795 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 KCTD3Q9Y597 815 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 NFS1Q9Y697 457 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 CKAP5Q14008 2032 aa15.2■□□□□ 0.02
CTNS-206ENST00000488623 A0A0J9YYE9 177 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 A0A0U1RQS6 177 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 A0A1W2PQ67 120 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 CCDC78A2IDD5 438 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 HEATR9A2RTY3 570 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 AURKAO14965 403 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 LDB2O43679 373 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 RNF40O75150 1001 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 TRBC1P01850 177 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 SHBGP04278 402 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ABHD2P08910 425 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ALPIP09923 528 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 HNF1BP35680 557 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 GRIA4P48058 902 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 SEPT6Q14141 434 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ELAVL3Q14576 367 aaKnown RBP15.19■□□□□ 0.02
CTNS-206ENST00000488623 POM121L1PQ3SYA9 428 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 FBXO43Q4G163 708 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 TSTD2Q5T7W7 516 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ARMC3Q5W041 872 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 SDE2Q6IQ49 451 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 KIAA1211LQ6NV74 962 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ESRP1Q6NXG1 681 aaKnown RBP15.19■□□□□ 0.02
CTNS-206ENST00000488623 TXNDC5Q8NBS9 432 aaKnown RBP15.19■□□□□ 0.02
CTNS-206ENST00000488623 OR2W6PQ8NHA6 318 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 PIP4K2CQ8TBX8 421 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 FBF1Q8TES7 1133 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
CTNS-206ENST00000488623 EDAQ92838 391 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 MFSD3Q96ES6 412 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ZIM3Q96PE6 472 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 MAGEE1Q9HCI5 957 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ARHGEF3Q9NR81 526 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 SLC2A6Q9UGQ3 507 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 RABGEF1Q9UJ41 708 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 MTF2Q9Y483 593 aaPredicted RBP15.19■□□□□ 0.02
CTNS-206ENST00000488623 ARL5AQ9Y689 179 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 RPS6KL1Q9Y6S9 549 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 FAM169AQ9Y6X4 670 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 ZNF318Q5VUA4 2279 aa15.19■□□□□ 0.02
CTNS-206ENST00000488623 A0A087WUV0 522 aaPredicted RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 ZCWPW2A0A1B0GU75 182 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 C16orf96A6NNT2 1141 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 BUD23O43709 281 aaKnown RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 USP1O94782 785 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 POLBP06746 335 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 NUDT17P0C025 328 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 CHRNB1P11230 501 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 STARD6P59095 220 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 PTPRCAPQ14761 206 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 CRYMQ14894 314 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 TAF1AQ15573 450 aaPredicted RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 CDKN3Q16667 212 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 SPANXN3Q5MJ09 141 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 ALS2CLQ60I27 953 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 BRAT1Q6PJG6 821 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 TRMT11Q7Z4G4 463 aaKnown RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 MMAAQ8IVH4 418 aaKnown RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 UNC5BQ8IZJ1 945 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 TTC30BQ8N4P2 665 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 PAF1Q8N7H5 531 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 GSDMBQ8TAX9 411 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 ZNF669Q96BR6 464 aaPredicted RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 ZBTB9Q96C00 473 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 SCRN2Q96FV2 425 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 RSPH9Q9H1X1 276 aaPredicted RBP15.18■□□□□ 0.02
CTNS-206ENST00000488623 VIPAS39Q9H9C1 493 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 CD248Q9HCU0 757 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 TREX1Q9NSU2 369 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 MOCS1Q9NZB8 636 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.18■□□□□ 0.02
CTNS-206ENST00000488623 FBXL21Q9UKT6 434 aa15.18■□□□□ 0.02
CTNS-206ENST00000488623 KMT2EQ8IZD2 1858 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 A0A1W2PQF6 199 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 TCRBV9S1A1TA0A576 114 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 KPNA3O00505 521 aaPredicted RBP15.17■□□□□ 0.02
CTNS-206ENST00000488623 ATP8B1O43520 1251 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 SYNCRIPO60506 623 aaKnown RBP15.17■□□□□ 0.02
CTNS-206ENST00000488623 SPAG6O75602 509 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 ALDH1A2O94788 518 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 PAPSS2O95340 614 aaPredicted RBP15.17■□□□□ 0.02
CTNS-206ENST00000488623 IL1BP01584 269 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 C1QAP02745 245 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
CTNS-206ENST00000488623 PHBP35232 272 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 POLR2LP62875 67 aaKnown RBP15.17■□□□□ 0.02
CTNS-206ENST00000488623 ZXDAP98168 799 aa15.17■□□□□ 0.02
CTNS-206ENST00000488623 SEMG2Q02383 582 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms