RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 C15orf59Q2T9L4 293 aaPredicted RBP12.37□□□□□ -0.43
TTC3-221ENST00000488522 RWDD4Q6NW29 188 aaKnown RBP12.37□□□□□ -0.43
TTC3-221ENST00000488522 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 DTX1Q86Y01 620 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 RTL3Q8N8U3 475 aaKnown RBP12.37□□□□□ -0.43
TTC3-221ENST00000488522 ATL2Q8NHH9 583 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 CPLX3Q8WVH0 158 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 RXFP2Q8WXD0 754 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 LRRN3Q9H3W5 708 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 EPB41L5Q9HCM4 733 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 LHX3Q9UBR4 397 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 METRNQ9UJH8 293 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 CAPN11Q9UMQ6 739 aa12.37□□□□□ -0.43
TTC3-221ENST00000488522 BUB1O43683 1085 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 GJB6O95452 261 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 RPLP0P05388 317 aaKnown RBP12.36□□□□□ -0.43
TTC3-221ENST00000488522 GLB1P16278 677 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 FERP16591 822 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 ITIH2P19823 946 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 CD82P27701 267 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 HTR1BP28222 390 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 CASP14P31944 242 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 MMP12P39900 470 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 KIAA1024LP59773 190 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 RHOAP61586 193 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 ZBED6P86452 979 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 PTP4A2Q12974 167 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 MTM1Q13496 603 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 PARP15Q460N3 678 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 LRRC73Q5JTD7 316 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 CERCAMQ5T4B2 595 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 NAA35Q5VZE5 725 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 FOXR1Q6PIV2 292 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 SLITRK4Q8IW52 837 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 CCDC185Q8N715 623 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 JOSD2Q8TAC2 188 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
TTC3-221ENST00000488522 APOOQ9BUR5 198 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 PDFQ9HBH1 243 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 DOLKQ9UPQ8 538 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 LUC7L2Q9Y383 392 aaKnown RBP12.36□□□□□ -0.43
TTC3-221ENST00000488522 ANKRD36A6QL64 1941 aa12.36□□□□□ -0.43
TTC3-221ENST00000488522 ARHGEF17Q96PE2 2063 aaPredicted RBP12.36□□□□□ -0.43
TTC3-221ENST00000488522 COL12A1Q99715 3063 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 HOXC4P09017 264 aaPredicted RBP12.35□□□□□ -0.43
TTC3-221ENST00000488522 SFTPCP11686 197 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 SRP54P61011 504 aaKnown RBP12.35□□□□□ -0.43
TTC3-221ENST00000488522 FMO1Q01740 532 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 CDR2Q01850 454 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 SERINC3Q13530 473 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 TGIF1Q15583 401 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 ASIC2Q16515 512 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 UGP2Q16851 508 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 CDO1Q16878 200 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 BRAT1Q6PJG6 821 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 DNAAF5Q86Y56 855 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 CCNJLQ8IV13 435 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 HID1Q8IV36 788 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 UMODL1-AS1Q8N2C9 162 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 TSACCQ96A04 125 aaPredicted RBP12.35□□□□□ -0.43
TTC3-221ENST00000488522 PDXPQ96GD0 296 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 WDR92Q96MX6 357 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 ZNF641Q96N77 438 aaPredicted RBP12.35□□□□□ -0.43
TTC3-221ENST00000488522 TUBGCP5Q96RT8 1024 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 FOXP3Q9BZS1 431 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 KLC2Q9H0B6 622 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 SYNDIG1Q9H7V2 258 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 PCDH12Q9NPG4 1184 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 SIRPGQ9P1W8 387 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 GULP1Q9UBP9 304 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 IL17BQ9UHF5 180 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 LOXL2Q9Y4K0 774 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
TTC3-221ENST00000488522 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 TNFRSF10CO14798 259 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 INSIG1O15503 277 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 SUV39H1O43463 412 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 NUDT21O43809 227 aaKnown RBP12.34□□□□□ -0.43
TTC3-221ENST00000488522 JMJD7P0C870 316 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
TTC3-221ENST00000488522 CTSEP14091 401 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 HGFP14210 728 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 CHRNB2P17787 502 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 CDC25BP30305 580 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 CSNK1DP48730 415 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 AIF1P55008 147 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 NFATC3Q12968 1075 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 HLTFQ14527 1009 aaKnown RBP eCLIP12.34□□□□□ -0.43
TTC3-221ENST00000488522 INPP5AQ14642 412 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 NR1D2Q14995 579 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 CYTH1Q15438 398 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 CLPPQ16740 277 aaPredicted RBP12.34□□□□□ -0.43
TTC3-221ENST00000488522 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms