RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	ESCO2	Q56NI9	601 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FAM133B	Q5BKY9	247 aa	Known RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	PIK3CD-AS1	Q5SR53	167 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	HEPHL1	Q6MZM0	1159 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	NAA16	Q6N069	864 aa	Predicted RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	SLC30A6	Q6NXT4	461 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	PDXDC1	Q6P996	788 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	NOXA1	Q86UR1	476 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	DENND6A	Q8IWF6	608 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	PARP16	Q8N5Y8	322 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	POC5	Q8NA72	575 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FAM98A	Q8NCA5	519 aa	Known RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	SLC44A5	Q8NCS7	719 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	CCDC191	Q8NCU4	936 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	SGCD	Q92629	289 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	NELL1	Q92832	810 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FBXL8	Q96CD0	374 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	ZNF570	Q96NI8	536 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	SIGLEC11	Q96RL6	698 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	WDR83	Q9BRX9	315 aa	Known RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	TEX12	Q9BXU0	123 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	IFIH1	Q9BYX4	1025 aa	Known RBP	4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	TKTL2	Q9H0I9	626 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	TMEM184C	Q9NVA4	438 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FBXL17	Q9UF56	701 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	A3GALT2	U3KPV4	340 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	PASK	Q96RG2	1323 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	CROCC2	H7BZ55	1655 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	PBRM1	Q86U86	1689 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FHOD3	Q2V2M9	1422 aa		4.89	□□□□□ -1.63
SRRM1-215	ENST00000488317	FANCD2	Q9BXW9	1451 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	LAMC3	Q9Y6N6	1575 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	DNMT1	P26358	1616 aa	Known RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	NES	P48681	1621 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	KIF14	Q15058	1648 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	SMIM35	A0A1B0GVV1	85 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TSPY2	A6NKD2	308 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	ENTPD3	O75355	529 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	RGS11	O94810	467 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	PGM3	O95394	542 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TSPY3	P0CV98	308 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TSPY8	P0CW00	308 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CBSL	P0DN79	551 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	NR2F1	P10589	423 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CHRNB1	P11230	501 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	SHMT1	P34896	483 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CBS	P35520	551 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	AVPR1A	P37288	418 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	LMAN1	P49257	510 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CXCR3	P49682	368 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CAMP	P49913	170 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	MFAP4	P55083	255 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CDH12	P55289	794 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	RRP1	P56182	461 aa	Known RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	PSMC6	P62333	389 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TSPY1	Q01534	308 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	LPIN1	Q14693	890 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	NTRK2	Q16620	822 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TMEM266	Q2M3C6	531 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	RD3	Q7Z3Z2	195 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	PRPF39	Q86UA1	669 aa	Known RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	HAPLN4	Q86UW8	402 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	SCML4	Q8N228	414 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TMTC2	Q8N394	836 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	ELMOD3	Q96FG2	381 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	AGAP2	Q99490	1192 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	SRSF8	Q9BRL6	282 aa	Known RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	QTRT1	Q9BXR0	403 aa	Known RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	TXLNGY	Q9BZA5	131 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	ANKRD10	Q9NXR5	420 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	OGFR	Q9NZT2	677 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	CEPT1	Q9Y6K0	416 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	MAU2	Q9Y6X3	613 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	ITSN2	Q9NZM3	1697 aa		4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	POLA1	P09884	1462 aa	Predicted RBP	4.88	□□□□□ -1.63
SRRM1-215	ENST00000488317	FAM90A8P	A6NJQ4	464 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317		A6NNC1	897 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	KCNU1	A8MYU2	1149 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	SH2B2	O14492	632 aa	Predicted RBP	4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	HCRTR2	O43614	444 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	CLDN7	O95471	211 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	APOA4	P06727	396 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	FAM90A13P	P0C7W8	464 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	FAM90A24P	P0C7X0	464 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	MYZAP	P0CAP1	466 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	CYP19A1	P11511	503 aa	Predicted RBP	4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	NRIP1	P48552	1158 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	CLCN3	P51790	818 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	ACSM2A	Q08AH3	577 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	NAE1	Q13564	534 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	RASA2	Q15283	850 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	SOWAHA	Q2M3V2	549 aa		4.87	□□□□□ -1.63
SRRM1-215	ENST00000488317	ACSM2B	Q68CK6	577 aa		4.87	□□□□□ -1.63

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