RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ATRNO75882 1429 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 TNS2Q63HR2 1409 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 ARHGAP10A1A4S6 786 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 TMEM247A6NEH6 219 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 CXorf65A6NEN9 183 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 LRRC53A6NM62 1247 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 KCNJ18B7U540 433 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 H7C1Q1 480 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 IFNL4K9M1U5 179 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 LIASO43766 372 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 USP12O75317 370 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 JTBO76095 146 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 SERPINC1P01008 464 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 EIF2S2P20042 333 aaKnown RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 PSMB10P40306 273 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 GARSP41250 739 aaKnown RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 GNAQP50148 359 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 EFNA5P52803 228 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 TAP1Q03518 808 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 CEBPZQ03701 1054 aaKnown RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 LRMPQ12912 555 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 EPS8Q12929 822 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 STK4Q13043 487 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 CRYMQ14894 314 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 C5orf22Q49AR2 442 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 SPECC1Q5M775 1068 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 ATG9BQ674R7 924 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 ZNF772Q68DY9 489 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 GRASPQ7Z6J2 395 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 PAQR4Q8N4S7 273 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 OR52N4Q8NGI2 321 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 UBE2Q2Q8WVN8 375 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 POMGNT1Q8WZA1 660 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 PIGBQ92521 554 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 FAM149B1Q96BN6 582 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 FEM1CQ96JP0 617 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 BBC3Q96PG8 261 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 GATA5Q9BWX5 397 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 MAK16Q9BXY0 300 aaKnown RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 FRMD8Q9BZ67 464 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 GLIS2Q9BZE0 524 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 SH2D4AQ9H788 454 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 POLR1BQ9H9Y6 1135 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 SCPEP1Q9HB40 452 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 TMOD3Q9NYL9 352 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 DBF4Q9UBU7 674 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 INTS6Q9UL03 887 aaKnown RBP4.23□□□□□ -1.73
PTCD3-216ENST00000487043 PCDHGB5Q9Y5G0 923 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 BCL9O00512 1426 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CACNA1FO60840 1977 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 A0A1W2PQ09 198 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 FRMD3A2A2Y4 597 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TSPY2A6NKD2 308 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 UBE2Q2LH0YL09 131 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 SMIM22K7EJ46 135 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 MGST3O14880 152 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 BCAT2O15382 392 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 MSI1O43347 362 aaKnown RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 NFATC1O95644 943 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 DDAH2O95865 285 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CLTBP09497 229 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TSPY3P0CV98 308 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TSPY8P0CW00 308 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 SLC2A4P14672 509 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ZNF8P17098 575 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 MAKP20794 623 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 EDN2P20800 178 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 MCM3P25205 808 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 KLRC2P26717 231 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 NNMTP40261 264 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 SOX2P48431 317 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 BLKP51451 505 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ARSFP54793 590 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 SIM1P81133 766 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TSPY1Q01534 308 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 GALNT3Q14435 633 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 MVPQ14764 893 aaKnown RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 PPP2R5BQ15173 497 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 ME3Q16798 604 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 DPCR1Q3MIW9 517 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 AKNAD1Q5T1N1 836 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 SERTAD4-AS1Q5TG53 156 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TMEM268Q5VZI3 342 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 SLC30A6Q6NXT4 461 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TMEM154Q6P9G4 183 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CHST9Q7L1S5 443 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 G2E3Q7L622 706 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 AMIGO2Q86SJ2 522 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 FAM47BQ8NA70 645 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CCDC191Q8NCU4 936 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 GDPD5Q8WTR4 605 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 KAT2BQ92831 832 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 GTF3C6Q969F1 213 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 JAKMIP2Q96AA8 810 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 REPS1Q96D71 796 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 FCRL5Q96RD9 977 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 CRAMP1Q96RY5 1269 aa4.22□□□□□ -1.73
PTCD3-216ENST00000487043 TEX13AQ9BXU3 409 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-216ENST00000487043 NUF2Q9BZD4 464 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms