RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 DEFB124Q8NES8 71 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 TFB1MQ8WVM0 346 aaKnown RBP18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CENPTQ96BT3 561 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 HAUS1Q96CS2 278 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 BMFQ96LC9 184 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 SEPT10Q9P0V9 454 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 PHTF1Q9UMS5 762 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 GUCA1BQ9UMX6 200 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 COQ6Q9Y2Z9 468 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 APOC4-APOC2K7ER74 178 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 FLRT2O43155 660 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 PCDHGA12O60330 932 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 FZD6O60353 706 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 APOC2P02655 101 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 ELFN1P0C7U0 828 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 CEACAM1P13688 526 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 RABIFP47224 123 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 IL9RQ01113 521 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 NIPAL4Q0D2K0 466 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 SUZ12Q15022 739 aaKnown RBP18.29■□□□□ 0.52
COL1A1-207ENST00000486572 PRAMEF14Q5SWL7 426 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 Q6ZSR6 202 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 B4GALNT4Q76KP1 1039 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 DCP2Q8IU60 420 aaKnown RBP18.29■□□□□ 0.52
COL1A1-207ENST00000486572 SLC22A18ASQ8N1D0 253 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 TDRD1Q9BXT4 1180 aaKnown RBP18.29■□□□□ 0.52
COL1A1-207ENST00000486572 CEP41Q9BYV8 373 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 OSBPL8Q9BZF1 889 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 GPR27Q9NS67 375 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 B4GALT6Q9UBX8 382 aa18.29■□□□□ 0.52
COL1A1-207ENST00000486572 PACSIN2Q9UNF0 486 aaPredicted RBP18.29■□□□□ 0.52
COL1A1-207ENST00000486572 KNL1Q8NG31 2342 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 MTSS1O43312 755 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 SH3BP5O60239 455 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 LZTS3O60299 673 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-207ENST00000486572 PYGMP11217 842 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 IGFALSP35858 605 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 RXRGP48443 463 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 IHHQ14623 411 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 LRRC14Q15048 493 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 AGERQ15109 404 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 CCDC181Q5TID7 509 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 LIPIQ6XZB0 460 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 DBX2Q6ZNG2 339 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 USP45Q70EL2 814 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 ZC3H18Q86VM9 953 aaKnown RBP18.28■□□□□ 0.52
COL1A1-207ENST00000486572 NDUFAF2Q8N183 169 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 TP53I13Q8NBR0 393 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-207ENST00000486572 PIH1D2Q8WWB5 315 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 AGAP3Q96P47 875 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 QKIQ96PU8 341 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL1A1-207ENST00000486572 MCCC1Q96RQ3 725 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-207ENST00000486572 HERPUD2Q9BSE4 406 aa18.28■□□□□ 0.52
COL1A1-207ENST00000486572 A8MX80 341 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 HACD1B0YJ81 288 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 GIPC1O14908 333 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.52
COL1A1-207ENST00000486572 MMP2P08253 660 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 PDHA1P08559 390 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 CYP2A6P11509 494 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-207ENST00000486572 PTPN3P26045 913 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 EPHA8P29322 1005 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-207ENST00000486572 VIPR1P32241 457 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 CD86P42081 329 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 PFN3P60673 137 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 NOMO1Q15155 1222 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 IRF4Q15306 451 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 SHBQ15464 509 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 INAVAQ3KP66 663 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 TEX44Q53QW1 395 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 ZNF662Q6ZS27 426 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 SETD7Q8WTS6 366 aaKnown RBP18.27■□□□□ 0.52
COL1A1-207ENST00000486572 SCRN2Q96FV2 425 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 HES6Q96HZ4 224 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 CAMK1GQ96NX5 476 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 MBNL1Q9NR56 388 aaKnown RBP18.27■□□□□ 0.52
COL1A1-207ENST00000486572 PCOLCE2Q9UKZ9 415 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 PPIL1Q9Y3C6 166 aa18.27■□□□□ 0.52
COL1A1-207ENST00000486572 CNOT1A5YKK6 2376 aaKnown RBP18.27■□□□□ 0.52
COL1A1-207ENST00000486572 NPIPB15A6NHN6 443 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-207ENST00000486572 TOR1BO14657 336 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 RECQL5O94762 991 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-207ENST00000486572 TJP3O95049 919 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 GRK6P43250 576 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 EPHB1P54762 984 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 RPL26P61254 145 aaKnown RBP18.26■□□□□ 0.51
COL1A1-207ENST00000486572 SKOR1P84550 965 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 ZNF211Q13398 564 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-207ENST00000486572 XRCC4Q13426 336 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 PDE1CQ14123 709 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-207ENST00000486572 CNGA3Q16281 694 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 WSCD2Q2TBF2 565 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 AADACL2Q6P093 401 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 KDM7AQ6ZMT4 941 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 ACTL9Q8TC94 416 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 SAP25Q8TEE9 199 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 IFT43Q96FT9 208 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 IMP4Q96G21 291 aaKnown RBP18.26■□□□□ 0.51
COL1A1-207ENST00000486572 PCDH9Q9HC56 1237 aa18.26■□□□□ 0.51
COL1A1-207ENST00000486572 LZTFL1Q9NQ48 299 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms