RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SEPT6Q14141 434 aa7□□□□□ -1.29
UBR4-214ENST00000486515 SPARCL1Q14515 664 aa7□□□□□ -1.29
UBR4-214ENST00000486515 SLC1A5Q15758 541 aa7□□□□□ -1.29
UBR4-214ENST00000486515 BBS9Q3SYG4 887 aa7□□□□□ -1.29
UBR4-214ENST00000486515 ARTNQ5T4W7 220 aa7□□□□□ -1.29
UBR4-214ENST00000486515 NAIF1Q69YI7 327 aaPredicted RBP7□□□□□ -1.29
UBR4-214ENST00000486515 CWF19L1Q69YN2 538 aaKnown RBP7□□□□□ -1.29
UBR4-214ENST00000486515 ALG1LQ6GMV1 187 aa7□□□□□ -1.29
UBR4-214ENST00000486515 LRRC8BQ6P9F7 803 aa7□□□□□ -1.29
UBR4-214ENST00000486515 NLRP9Q7RTR0 991 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PRUNE1Q86TP1 453 aa7□□□□□ -1.29
UBR4-214ENST00000486515 KBTBD6Q86V97 674 aa7□□□□□ -1.29
UBR4-214ENST00000486515 CAMK1DQ8IU85 385 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PGBD5Q8N414 524 aa7□□□□□ -1.29
UBR4-214ENST00000486515 ZCCHC9Q8N567 271 aaKnown RBP7□□□□□ -1.29
UBR4-214ENST00000486515 MCUQ8NE86 351 aa7□□□□□ -1.29
UBR4-214ENST00000486515 MYRIPQ8NFW9 859 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PJA1Q8NG27 643 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PIP4K2CQ8TBX8 421 aa7□□□□□ -1.29
UBR4-214ENST00000486515 NETO1Q8TDF5 533 aa7□□□□□ -1.29
UBR4-214ENST00000486515 BLOC1S5Q8TDH9 187 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PYROXD1Q8WU10 500 aa7□□□□□ -1.29
UBR4-214ENST00000486515 CPT1BQ92523 772 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PTPRN2Q92932 1015 aa7□□□□□ -1.29
UBR4-214ENST00000486515 RAB7BQ96AH8 199 aa7□□□□□ -1.29
UBR4-214ENST00000486515 LRRC39Q96DD0 335 aa7□□□□□ -1.29
UBR4-214ENST00000486515 SPACA7Q96KW9 195 aa7□□□□□ -1.29
UBR4-214ENST00000486515 TTC25Q96NG3 672 aa7□□□□□ -1.29
UBR4-214ENST00000486515 TTC1Q99614 292 aa7□□□□□ -1.29
UBR4-214ENST00000486515 GABRG3Q99928 467 aa7□□□□□ -1.29
UBR4-214ENST00000486515 CCDC77Q9BR77 488 aa7□□□□□ -1.29
UBR4-214ENST00000486515 TDRD1Q9BXT4 1180 aaKnown RBP7□□□□□ -1.29
UBR4-214ENST00000486515 GPR63Q9BZJ6 419 aa7□□□□□ -1.29
UBR4-214ENST00000486515 TRABDQ9H4I3 376 aa7□□□□□ -1.29
UBR4-214ENST00000486515 FBRSL1Q9HCM7 1045 aaKnown RBP7□□□□□ -1.29
UBR4-214ENST00000486515 PRSS16Q9NQE7 514 aa7□□□□□ -1.29
UBR4-214ENST00000486515 RAD18Q9NS91 495 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PHTF1Q9UMS5 762 aa7□□□□□ -1.29
UBR4-214ENST00000486515 MYO9AB2RTY4 2548 aa7□□□□□ -1.29
UBR4-214ENST00000486515 PIEZO2Q9H5I5 2752 aa7□□□□□ -1.29
UBR4-214ENST00000486515 SPTA1P02549 2419 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 UQCRHLA0A096LP55 91 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 TTC24A2A3L6 582 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 UPK3BL1B0FP48 263 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CHURC1-FNTBB4DL54 471 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 UPK3BL2E5RIL1 263 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 MUSKO15146 869 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 EIF3HO15372 352 aaKnown RBP eCLIP6.99□□□□□ -1.292e-11■■■□□ 17.1
UBR4-214ENST00000486515 LAMTOR5O43504 91 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 NDUFS2O75306 463 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 USP12O75317 370 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PPFIA2O75334 1257 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SUN1O94901 812 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PGLSO95336 258 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 APBB3O95704 486 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 TTC4O95801 387 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 AGTP01019 485 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SLC4A1P02730 911 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 UQCRHP07919 91 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CHRNB1P11230 501 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CR2P20023 1033 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ITGB7P26010 798 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SLC8A1P32418 973 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PPARGP37231 505 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 HADHAP40939 763 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CXCL12P48061 93 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SATB1Q01826 763 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 NIPAL4Q0D2K0 466 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PDIA2Q13087 525 aaKnown RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 CAMK2GQ13555 558 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 GALNT3Q14435 633 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 KCNJ11Q14654 390 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ELF2Q15723 593 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CST6Q15828 149 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CRY1Q16526 586 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SKIDA1Q1XH10 827 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 POM121L1PQ3SYA9 428 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PCID2Q5JVF3 399 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 C9orf64Q5T6V5 341 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 RNASEH2BQ5TBB1 312 aaKnown RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 ARMC3Q5W041 872 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ZDHHC20Q5W0Z9 365 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 DENND2CQ68D51 928 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 HIBCHQ6NVY1 386 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 WDR93Q6P2C0 686 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 ERN2Q76MJ5 926 aaKnown RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 SYT13Q7L8C5 426 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 GLT6D1Q7Z4J2 308 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PRPF39Q86UA1 669 aaKnown RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 TMPRSS6Q8IU80 811 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ZBED8Q8IZ13 594 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SPEM1Q8N4L4 309 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 OTUD6BQ8N6M0 293 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 NAT8LQ8N9F0 302 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 GLIS1Q8NBF1 620 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CHST14Q8NCH0 376 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 OR52K1Q8NGK4 314 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms