RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 PDCP20941 246 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 TXLNAP40222 546 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 GCLMP48507 274 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 CCNHP51946 323 aaPredicted RBP8.32□□□□□ -1.08
XRN1-212ENST00000486211 PITX1P78337 314 aaPredicted RBP8.32□□□□□ -1.08
XRN1-212ENST00000486211 KRT83P78385 493 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 MAP7Q14244 749 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 RABGAP1LQ5R372 815 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 NKAIN2Q5VXU1 208 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 TAF8Q7Z7C8 310 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 TTC39CQ8N584 583 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 CCL4L1Q8NHW4 92 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 OR1E3Q8WZA6 343 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 SEMA4DQ92854 862 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 EEF2KMTQ96G04 330 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 FAXDC2Q96IV6 333 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 HEPHQ9BQS7 1158 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 C2orf49Q9BVC5 232 aaPredicted RBP8.32□□□□□ -1.08
XRN1-212ENST00000486211 ZSCAN16Q9H4T2 348 aaPredicted RBP8.32□□□□□ -1.08
XRN1-212ENST00000486211 APMAPQ9HDC9 416 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 MRPL40Q9NQ50 206 aaKnown RBP8.32□□□□□ -1.08
XRN1-212ENST00000486211 PDP2Q9P2J9 529 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 HESX1Q9UBX0 185 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 KLQ9UEF7 1012 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 CLIC4Q9Y696 253 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 CHD5Q8TDI0 1954 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 ARHGEF17Q96PE2 2063 aaPredicted RBP8.31□□□□□ -1.08
XRN1-212ENST00000486211 ANKUB1A6NFN9 424 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 PPP6R2O75170 966 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 TM7SF2O76062 418 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 TNFP01375 233 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 TRIM49P0CI25 452 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 TRIM49CP0CI26 452 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 MX2P20592 715 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 DLSTP36957 453 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 GPR3P46089 330 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 AUHQ13825 339 aaKnown RBP8.31□□□□□ -1.08
XRN1-212ENST00000486211 ZRSR2Q15696 482 aaKnown RBP8.31□□□□□ -1.08
XRN1-212ENST00000486211 KLHL40Q2TBA0 621 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 WSCD2Q2TBF2 565 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 CPZQ66K79 652 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 SLC6A19Q695T7 634 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 CEACAM20Q6UY09 585 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 BEND5Q7L4P6 421 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 GDF7Q7Z4P5 450 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 IRF2BP1Q8IU81 584 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 ESX1Q8N693 406 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 PDILTQ8N807 584 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 ATP6V0D2Q8N8Y2 350 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 DCAF4L2Q8NA75 395 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 GOLGA5Q8TBA6 731 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 FUBP1Q96AE4 644 aaKnown RBP8.31□□□□□ -1.08
XRN1-212ENST00000486211 SNRNP40Q96DI7 357 aaKnown RBP8.31□□□□□ -1.08
XRN1-212ENST00000486211 WDR92Q96MX6 357 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 RPRD1AQ96P16 312 aaPredicted RBP8.31□□□□□ -1.08
XRN1-212ENST00000486211 ZSWIM1Q9BR11 485 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 ZPBPQ9BS86 351 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 APOOQ9BUR5 198 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 SLC25A23Q9BV35 468 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 TMEM168Q9H0V1 697 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 MUC3BQ9H195 1237 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 DPEP2Q9H4A9 486 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 FGF22Q9HCT0 170 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 SLC39A2Q9NP94 309 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 TIMMDC1Q9NPL8 285 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 FBXO8Q9NRD0 319 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 CROTQ9UKG9 612 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 OR1A2Q9Y585 309 aa8.31□□□□□ -1.08
XRN1-212ENST00000486211 DIDO1Q9BTC0 2240 aaKnown RBP8.3□□□□□ -1.08
XRN1-212ENST00000486211 IGHV1OR21-1A0A087WYE8 117 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 A0A0D9SEW6 157 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 RHPN2P1A8MT19 583 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 PRSS44E7EML9 344 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 H3BQV1 296 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 CLDN11O75508 207 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 ZMPSTE24O75844 475 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 FBXO21O94952 628 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 TRUB2O95900 331 aaKnown RBP8.3□□□□□ -1.08
XRN1-212ENST00000486211 RECKO95980 971 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 ITIH2P19823 946 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 NFKBIAP25963 317 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 ITGA3P26006 1051 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 HTR1BP28222 390 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 GKP32189 559 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 PTGER4P35408 488 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 SERPINH1P50454 418 aaKnown RBP8.3□□□□□ -1.08
XRN1-212ENST00000486211 VAMP7P51809 220 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 INPP5AQ14642 412 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 C5orf22Q49AR2 442 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 ZNF805Q5CZA5 627 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 CARD16Q5EG05 197 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 LRRC73Q5JTD7 316 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 TMEM71Q6P5X7 295 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 LCLAT1Q6UWP7 414 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 UNC13DQ70J99 1090 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 ARHGAP22Q7Z5H3 698 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 PCDH20Q8N6Y1 951 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms